Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.49□□□□□ -0.73
Upk2P38575 Gm38317-201ENSMUST00000195564 343 ntBASIC10.49□□□□□ -0.73
Upk2P38575 Gm43179-201ENSMUST00000198797 275 ntBASIC10.49□□□□□ -0.73
Upk2P38575 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Upk2P38575 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Upk2P38575 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Upk2P38575 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.49□□□□□ -0.73
Upk2P38575 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.49□□□□□ -0.73
Upk2P38575 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Upk2P38575 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Upk2P38575 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Upk2P38575 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Upk2P38575 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Upk2P38575 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.49□□□□□ -0.73
Upk2P38575 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.49□□□□□ -0.73
Upk2P38575 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.49□□□□□ -0.73
Upk2P38575 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Upk2P38575 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.49□□□□□ -0.73
Upk2P38575 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Upk2P38575 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Upk2P38575 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Upk2P38575 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Upk2P38575 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Upk2P38575 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Upk2P38575 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.49□□□□□ -0.73
Upk2P38575 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Upk2P38575 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Upk2P38575 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Upk2P38575 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Upk2P38575 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.49□□□□□ -0.73
Upk2P38575 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Upk2P38575 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Upk2P38575 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.48□□□□□ -0.73
Upk2P38575 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Upk2P38575 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Upk2P38575 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Upk2P38575 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.48□□□□□ -0.73
Upk2P38575 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Upk2P38575 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Upk2P38575 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.48□□□□□ -0.73
Upk2P38575 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Upk2P38575 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Upk2P38575 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Upk2P38575 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Upk2P38575 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Upk2P38575 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Upk2P38575 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Upk2P38575 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Upk2P38575 Gm13296-201ENSMUST00000117854 997 ntBASIC10.48□□□□□ -0.73
Upk2P38575 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Upk2P38575 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.48□□□□□ -0.73
Upk2P38575 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Upk2P38575 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Upk2P38575 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Upk2P38575 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Upk2P38575 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.48□□□□□ -0.73
Upk2P38575 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Upk2P38575 Gm19287-201ENSMUST00000203190 358 ntBASIC10.48□□□□□ -0.73
Upk2P38575 Gm43962-201ENSMUST00000203898 190 ntBASIC10.48□□□□□ -0.73
Upk2P38575 Gm7783-201ENSMUST00000204795 781 ntBASIC10.48□□□□□ -0.73
Upk2P38575 Gm45331-201ENSMUST00000209868 554 ntBASIC10.48□□□□□ -0.73
Upk2P38575 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.48□□□□□ -0.73
Upk2P38575 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Upk2P38575 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Upk2P38575 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.48□□□□□ -0.73
Upk2P38575 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.48□□□□□ -0.73
Upk2P38575 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Upk2P38575 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Upk2P38575 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Upk2P38575 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Upk2P38575 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Upk2P38575 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.48□□□□□ -0.73
Upk2P38575 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Upk2P38575 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Upk2P38575 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Upk2P38575 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Upk2P38575 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Upk2P38575 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Upk2P38575 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Upk2P38575 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Upk2P38575 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Upk2P38575 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Upk2P38575 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Upk2P38575 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Upk2P38575 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Upk2P38575 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Upk2P38575 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Upk2P38575 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Upk2P38575 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Upk2P38575 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Upk2P38575 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Upk2P38575 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Upk2P38575 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.47□□□□□ -0.73
Upk2P38575 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Upk2P38575 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
Upk2P38575 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Upk2P38575 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Upk2P38575 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Upk2P38575 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.47□□□□□ -0.73
Upk2P38575 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms