Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm17208-201ENSMUST00000168388 535 ntBASIC11□□□□□ -0.65
Nedd8P29595 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11□□□□□ -0.65
Nedd8P29595 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11□□□□□ -0.65
Nedd8P29595 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nedd8P29595 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11□□□□□ -0.65
Nedd8P29595 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11□□□□□ -0.65
Nedd8P29595 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nedd8P29595 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nedd8P29595 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nedd8P29595 Gm20445-201ENSMUST00000061905 565 ntBASIC11□□□□□ -0.65
Nedd8P29595 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11□□□□□ -0.65
Nedd8P29595 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nedd8P29595 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Nedd8P29595 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Nedd8P29595 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Nedd8P29595 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nedd8P29595 Gm5703-201ENSMUST00000186658 3973 ntBASIC11□□□□□ -0.65
Nedd8P29595 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nedd8P29595 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Nedd8P29595 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nedd8P29595 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nedd8P29595 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nedd8P29595 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Nedd8P29595 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC11□□□□□ -0.65
Nedd8P29595 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11□□□□□ -0.65
Nedd8P29595 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nedd8P29595 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nedd8P29595 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nedd8P29595 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Nedd8P29595 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Nedd8P29595 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Nedd8P29595 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Nedd8P29595 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Nedd8P29595 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.99□□□□□ -0.65
Nedd8P29595 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Nedd8P29595 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Gm8805-201ENSMUST00000117848 313 ntBASIC10.99□□□□□ -0.65
Nedd8P29595 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC10.99□□□□□ -0.65
Nedd8P29595 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.99□□□□□ -0.65
Nedd8P29595 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.99□□□□□ -0.65
Nedd8P29595 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.99□□□□□ -0.65
Nedd8P29595 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC10.99□□□□□ -0.65
Nedd8P29595 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.99□□□□□ -0.65
Nedd8P29595 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.99□□□□□ -0.65
Nedd8P29595 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Nedd8P29595 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.99□□□□□ -0.65
Nedd8P29595 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Nedd8P29595 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Nedd8P29595 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Nedd8P29595 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
Nedd8P29595 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Nedd8P29595 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nedd8P29595 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Nedd8P29595 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.98□□□□□ -0.65
Nedd8P29595 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Nedd8P29595 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Nedd8P29595 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Nedd8P29595 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms