Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
TP20293 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TP20293 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TP20293 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
TP20293 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
TP20293 Olfr582-201ENSMUST00000098212 960 ntBASIC11.32□□□□□ -0.6
TP20293 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
TP20293 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TP20293 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TP20293 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TP20293 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TP20293 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
TP20293 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
TP20293 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TP20293 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TP20293 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TP20293 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TP20293 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
TP20293 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TP20293 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TP20293 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TP20293 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TP20293 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TP20293 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TP20293 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TP20293 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TP20293 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.31□□□□□ -0.6
TP20293 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TP20293 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 Gm24830-201ENSMUST00000102024 166 ntBASIC11.31□□□□□ -0.6
TP20293 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 Gm12015-201ENSMUST00000117065 843 ntBASIC11.31□□□□□ -0.6
TP20293 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
TP20293 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
TP20293 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.31□□□□□ -0.6
TP20293 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.31□□□□□ -0.6
TP20293 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.31□□□□□ -0.6
TP20293 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.31□□□□□ -0.6
TP20293 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.31□□□□□ -0.6
TP20293 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 Gm10312-201ENSMUST00000078515 489 ntBASIC11.31□□□□□ -0.6
TP20293 Gm26232-201ENSMUST00000083360 166 ntBASIC11.31□□□□□ -0.6
TP20293 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.31□□□□□ -0.6
TP20293 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.31□□□□□ -0.6
TP20293 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.31□□□□□ -0.6
TP20293 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
TP20293 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
TP20293 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.31□□□□□ -0.6
TP20293 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.31□□□□□ -0.6
TP20293 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.31□□□□□ -0.6
TP20293 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TP20293 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TP20293 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TP20293 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.3□□□□□ -0.6
TP20293 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TP20293 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
TP20293 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TP20293 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TP20293 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.3□□□□□ -0.6
TP20293 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TP20293 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.3□□□□□ -0.6
TP20293 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
TP20293 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
TP20293 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TP20293 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
TP20293 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
TP20293 Gm14109-201ENSMUST00000118814 309 ntBASIC11.3□□□□□ -0.6
TP20293 Gm13350-201ENSMUST00000120519 479 ntBASIC11.3□□□□□ -0.6
TP20293 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.3□□□□□ -0.6
TP20293 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.3□□□□□ -0.6
TP20293 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.3□□□□□ -0.6
TP20293 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TP20293 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.3□□□□□ -0.6
TP20293 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms