Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VimP20152 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.1□□□□□ -0.47
VimP20152 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.1□□□□□ -0.47
VimP20152 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VimP20152 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VimP20152 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VimP20152 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VimP20152 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC12.1□□□□□ -0.47
VimP20152 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.1□□□□□ -0.47
VimP20152 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VimP20152 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VimP20152 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VimP20152 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VimP20152 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VimP20152 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VimP20152 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC12.1□□□□□ -0.47
VimP20152 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VimP20152 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VimP20152 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
VimP20152 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.1□□□□□ -0.47
VimP20152 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
VimP20152 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.1□□□□□ -0.47
VimP20152 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VimP20152 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VimP20152 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VimP20152 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VimP20152 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC12.1□□□□□ -0.47
VimP20152 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VimP20152 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VimP20152 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
VimP20152 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VimP20152 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
VimP20152 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VimP20152 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
VimP20152 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VimP20152 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
VimP20152 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VimP20152 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VimP20152 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
VimP20152 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VimP20152 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
VimP20152 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VimP20152 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VimP20152 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
VimP20152 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VimP20152 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
VimP20152 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VimP20152 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
VimP20152 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VimP20152 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.09□□□□□ -0.47
VimP20152 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.09□□□□□ -0.47
VimP20152 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.09□□□□□ -0.47
VimP20152 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC12.09□□□□□ -0.47
VimP20152 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VimP20152 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VimP20152 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VimP20152 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.09□□□□□ -0.47
VimP20152 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VimP20152 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.09□□□□□ -0.47
VimP20152 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.09□□□□□ -0.47
VimP20152 Gm26185-201ENSMUST00000157692 266 ntBASIC12.09□□□□□ -0.47
VimP20152 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VimP20152 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VimP20152 Gm27397-201ENSMUST00000184997 107 ntBASIC12.09□□□□□ -0.47
VimP20152 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.09□□□□□ -0.47
VimP20152 Gm9136-201ENSMUST00000193368 454 ntBASIC12.09□□□□□ -0.47
VimP20152 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.09□□□□□ -0.47
VimP20152 AW822252-206ENSMUST00000208904 237 ntBASIC12.09□□□□□ -0.47
VimP20152 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VimP20152 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
VimP20152 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
VimP20152 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC12.09□□□□□ -0.47
VimP20152 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
VimP20152 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VimP20152 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VimP20152 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
VimP20152 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VimP20152 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VimP20152 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
VimP20152 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VimP20152 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VimP20152 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VimP20152 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VimP20152 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
VimP20152 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
VimP20152 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VimP20152 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
VimP20152 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
VimP20152 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
VimP20152 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
VimP20152 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VimP20152 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
VimP20152 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VimP20152 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
VimP20152 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
VimP20152 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
VimP20152 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
VimP20152 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VimP20152 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
VimP20152 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms