Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Gm23699-201ENSMUST00000158835 135 ntBASIC13.59□□□□□ -0.23
Kcna1P16388 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.59□□□□□ -0.23
Kcna1P16388 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Kcna1P16388 Gm9192-201ENSMUST00000183221 985 ntBASIC13.59□□□□□ -0.23
Kcna1P16388 Gm9555-201ENSMUST00000200908 583 ntBASIC13.59□□□□□ -0.23
Kcna1P16388 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Kcna1P16388 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Kcna1P16388 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Kcna1P16388 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Kcna1P16388 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.59□□□□□ -0.23
Kcna1P16388 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Kcna1P16388 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Kcna1P16388 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Kcna1P16388 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.59□□□□□ -0.23
Kcna1P16388 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Kcna1P16388 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Kcna1P16388 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Kcna1P16388 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Kcna1P16388 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Kcna1P16388 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.59□□□□□ -0.23
Kcna1P16388 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Kcna1P16388 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Kcna1P16388 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Kcna1P16388 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Kcna1P16388 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Kcna1P16388 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Kcna1P16388 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Kcna1P16388 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Kcna1P16388 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Kcna1P16388 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Kcna1P16388 Gm14058-201ENSMUST00000116082 735 ntBASIC13.58□□□□□ -0.24
Kcna1P16388 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.58□□□□□ -0.24
Kcna1P16388 Gm8566-201ENSMUST00000120174 465 ntBASIC13.58□□□□□ -0.24
Kcna1P16388 Gm11660-201ENSMUST00000120955 412 ntBASIC13.58□□□□□ -0.24
Kcna1P16388 Gm14441-201ENSMUST00000121960 540 ntBASIC13.58□□□□□ -0.24
Kcna1P16388 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.58□□□□□ -0.24
Kcna1P16388 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Kcna1P16388 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.58□□□□□ -0.24
Kcna1P16388 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Kcna1P16388 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.58□□□□□ -0.24
Kcna1P16388 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Kcna1P16388 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Kcna1P16388 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Kcna1P16388 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.58□□□□□ -0.24
Kcna1P16388 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Kcna1P16388 AC151275.1-201ENSMUST00000224870 585 ntBASIC13.58□□□□□ -0.24
Kcna1P16388 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Kcna1P16388 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Kcna1P16388 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
Kcna1P16388 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.58□□□□□ -0.24
Kcna1P16388 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Kcna1P16388 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Kcna1P16388 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Kcna1P16388 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Kcna1P16388 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Kcna1P16388 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Kcna1P16388 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Kcna1P16388 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Kcna1P16388 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Kcna1P16388 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Kcna1P16388 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Kcna1P16388 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Kcna1P16388 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Kcna1P16388 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Kcna1P16388 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Kcna1P16388 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.57□□□□□ -0.24
Kcna1P16388 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Kcna1P16388 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.57□□□□□ -0.24
Kcna1P16388 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.57□□□□□ -0.24
Kcna1P16388 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Kcna1P16388 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Kcna1P16388 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Kcna1P16388 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Kcna1P16388 Gm7851-201ENSMUST00000117574 323 ntBASIC13.57□□□□□ -0.24
Kcna1P16388 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Kcna1P16388 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.57□□□□□ -0.24
Kcna1P16388 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Kcna1P16388 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Kcna1P16388 Mir3102-201ENSMUST00000175555 104 ntBASIC13.57□□□□□ -0.24
Kcna1P16388 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Kcna1P16388 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.57□□□□□ -0.24
Kcna1P16388 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.57□□□□□ -0.24
Kcna1P16388 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.57□□□□□ -0.24
Kcna1P16388 Gm19287-201ENSMUST00000203190 358 ntBASIC13.57□□□□□ -0.24
Kcna1P16388 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.57□□□□□ -0.24
Kcna1P16388 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC13.57□□□□□ -0.24
Kcna1P16388 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Kcna1P16388 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Kcna1P16388 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Kcna1P16388 Gm45428-201ENSMUST00000209619 1789 ntBASIC13.57□□□□□ -0.24
Kcna1P16388 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Kcna1P16388 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Kcna1P16388 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Kcna1P16388 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Kcna1P16388 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Kcna1P16388 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Kcna1P16388 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Kcna1P16388 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.57□□□□□ -0.24
Kcna1P16388 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Kcna1P16388 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms