Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Hoxc6P10629 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc6P10629 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc6P10629 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc6P10629 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Hoxc6P10629 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.25□□□□□ -0.29
Hoxc6P10629 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc6P10629 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc6P10629 Gm25063-201ENSMUST00000104666 94 ntBASIC13.25□□□□□ -0.29
Hoxc6P10629 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Hoxc6P10629 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC13.25□□□□□ -0.29
Hoxc6P10629 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC13.25□□□□□ -0.29
Hoxc6P10629 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Hoxc6P10629 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc6P10629 Gm37981-201ENSMUST00000194280 535 ntBASIC13.25□□□□□ -0.29
Hoxc6P10629 AC102368.1-201ENSMUST00000227161 892 ntBASIC13.25□□□□□ -0.29
Hoxc6P10629 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc6P10629 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc6P10629 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Hoxc6P10629 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc6P10629 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc6P10629 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc6P10629 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC13.25□□□□□ -0.29
Hoxc6P10629 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc6P10629 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc6P10629 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Hoxc6P10629 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc6P10629 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc6P10629 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Hoxc6P10629 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc6P10629 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.25□□□□□ -0.29
Hoxc6P10629 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.25□□□□□ -0.29
Hoxc6P10629 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc6P10629 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc6P10629 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Hoxc6P10629 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc6P10629 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
Hoxc6P10629 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.25□□□□□ -0.29
Hoxc6P10629 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc6P10629 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc6P10629 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc6P10629 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc6P10629 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc6P10629 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc6P10629 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.24□□□□□ -0.29
Hoxc6P10629 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.24□□□□□ -0.29
Hoxc6P10629 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc6P10629 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc6P10629 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc6P10629 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Hoxc6P10629 Gm9116-201ENSMUST00000192400 1018 ntBASIC13.24□□□□□ -0.29
Hoxc6P10629 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc6P10629 Gm7940-201ENSMUST00000218195 769 ntBASIC13.24□□□□□ -0.29
Hoxc6P10629 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc6P10629 CT009536.2-201ENSMUST00000225370 665 ntBASIC13.24□□□□□ -0.29
Hoxc6P10629 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Hoxc6P10629 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc6P10629 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc6P10629 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc6P10629 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Hoxc6P10629 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc6P10629 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc6P10629 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Hoxc6P10629 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.24□□□□□ -0.29
Hoxc6P10629 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc6P10629 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc6P10629 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.24□□□□□ -0.29
Hoxc6P10629 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.23□□□□□ -0.29
Hoxc6P10629 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc6P10629 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.23□□□□□ -0.29
Hoxc6P10629 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.23□□□□□ -0.29
Hoxc6P10629 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc6P10629 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.23□□□□□ -0.29
Hoxc6P10629 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc6P10629 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Hoxc6P10629 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.23□□□□□ -0.29
Hoxc6P10629 Gm12990-201ENSMUST00000120372 468 ntBASIC13.23□□□□□ -0.29
Hoxc6P10629 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC13.23□□□□□ -0.29
Hoxc6P10629 Gm8459-201ENSMUST00000162504 760 ntBASIC13.23□□□□□ -0.29
Hoxc6P10629 Gm10807-201ENSMUST00000177134 795 ntBASIC13.23□□□□□ -0.29
Hoxc6P10629 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc6P10629 Mir6407-201ENSMUST00000184510 101 ntBASIC13.23□□□□□ -0.29
Hoxc6P10629 Gm17889-201ENSMUST00000198410 598 ntBASIC13.23□□□□□ -0.29
Hoxc6P10629 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc6P10629 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc6P10629 Gm25201-201ENSMUST00000083093 170 ntBASIC13.23□□□□□ -0.29
Hoxc6P10629 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc6P10629 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc6P10629 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc6P10629 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Hoxc6P10629 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.23□□□□□ -0.29
Hoxc6P10629 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc6P10629 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc6P10629 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc6P10629 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc6P10629 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc6P10629 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc6P10629 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Hoxc6P10629 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc6P10629 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms