Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Gm13665-201ENSMUST00000120830 528 ntBASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Gm26361-201ENSMUST00000158868 186 ntBASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Gm9230-201ENSMUST00000188228 532 ntBASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Rprl1-202ENSMUST00000198476 238 ntBASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Gm45224-201ENSMUST00000208203 414 ntBASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp6P0C0A3 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Gm12015-201ENSMUST00000117065 843 ntBASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Gm27390-201ENSMUST00000184516 176 ntBASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Gm4034-201ENSMUST00000187674 480 ntBASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.04□□□□□ -0.32
Chmp6P0C0A3 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp6P0C0A3 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp6P0C0A3 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Chmp6P0C0A3 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Chmp6P0C0A3 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp6P0C0A3 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp6P0C0A3 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp6P0C0A3 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Chmp6P0C0A3 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp6P0C0A3 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp6P0C0A3 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp6P0C0A3 Gm11989-201ENSMUST00000117240 672 ntBASIC13.03□□□□□ -0.32
Chmp6P0C0A3 Gm13296-201ENSMUST00000117854 997 ntBASIC13.03□□□□□ -0.32
Chmp6P0C0A3 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.03□□□□□ -0.32
Chmp6P0C0A3 Gm11362-201ENSMUST00000118838 850 ntBASIC13.03□□□□□ -0.32
Chmp6P0C0A3 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.03□□□□□ -0.32
Chmp6P0C0A3 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.03□□□□□ -0.32
Chmp6P0C0A3 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp6P0C0A3 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.03□□□□□ -0.32
Chmp6P0C0A3 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.03□□□□□ -0.32
Chmp6P0C0A3 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.03□□□□□ -0.32
Chmp6P0C0A3 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp6P0C0A3 Gm44262-201ENSMUST00000204969 372 ntBASIC13.03□□□□□ -0.32
Chmp6P0C0A3 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.03□□□□□ -0.32
Chmp6P0C0A3 Gm45598-202ENSMUST00000210719 986 ntBASIC13.03□□□□□ -0.32
Chmp6P0C0A3 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp6P0C0A3 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms