Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm13937-201ENSMUST00000121000 988 ntBASIC14.13□□□□□ -0.15
Col3a1P08121 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col3a1P08121 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Col3a1P08121 Gm28324-201ENSMUST00000187913 264 ntBASIC14.13□□□□□ -0.15
Col3a1P08121 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC14.13□□□□□ -0.15
Col3a1P08121 Gm35960-201ENSMUST00000202712 767 ntBASIC14.13□□□□□ -0.15
Col3a1P08121 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC14.13□□□□□ -0.15
Col3a1P08121 Gm9661-201ENSMUST00000221611 1122 ntBASIC14.13□□□□□ -0.15
Col3a1P08121 Gm19009-201ENSMUST00000223072 823 ntBASIC14.13□□□□□ -0.15
Col3a1P08121 Prrxl1-205ENSMUST00000228878 723 ntBASIC14.13□□□□□ -0.15
Col3a1P08121 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Col3a1P08121 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col3a1P08121 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Col3a1P08121 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col3a1P08121 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col3a1P08121 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col3a1P08121 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col3a1P08121 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC14.13□□□□□ -0.15
Col3a1P08121 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col3a1P08121 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col3a1P08121 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col3a1P08121 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col3a1P08121 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.13□□□□□ -0.15
Col3a1P08121 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col3a1P08121 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col3a1P08121 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col3a1P08121 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col3a1P08121 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col3a1P08121 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Col3a1P08121 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col3a1P08121 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col3a1P08121 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC14.12□□□□□ -0.15
Col3a1P08121 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC14.12□□□□□ -0.15
Col3a1P08121 Gm17877-201ENSMUST00000192578 814 ntBASIC14.12□□□□□ -0.15
Col3a1P08121 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col3a1P08121 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC14.12□□□□□ -0.15
Col3a1P08121 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col3a1P08121 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Col3a1P08121 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col3a1P08121 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col3a1P08121 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC14.12□□□□□ -0.15
Col3a1P08121 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col3a1P08121 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col3a1P08121 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col3a1P08121 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col3a1P08121 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Col3a1P08121 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col3a1P08121 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col3a1P08121 Gm8146-201ENSMUST00000192106 1847 ntBASIC14.12□□□□□ -0.15
Col3a1P08121 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col3a1P08121 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col3a1P08121 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC14.12□□□□□ -0.15
Col3a1P08121 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col3a1P08121 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Col3a1P08121 Gm43773-201ENSMUST00000198548 2162 ntBASIC14.12□□□□□ -0.15
Col3a1P08121 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
Col3a1P08121 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col3a1P08121 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col3a1P08121 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.12□□□□□ -0.15
Col3a1P08121 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC14.12□□□□□ -0.15
Col3a1P08121 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC14.12□□□□□ -0.15
Col3a1P08121 Gm12247-201ENSMUST00000117585 670 ntBASIC14.12□□□□□ -0.15
Col3a1P08121 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC14.12□□□□□ -0.15
Col3a1P08121 Gm4879-201ENSMUST00000122190 1272 ntBASIC14.12□□□□□ -0.15
Col3a1P08121 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC14.12□□□□□ -0.15
Col3a1P08121 Gm19015-201ENSMUST00000184002 1189 ntBASIC14.12□□□□□ -0.15
Col3a1P08121 Gm18065-201ENSMUST00000221395 526 ntBASIC14.12□□□□□ -0.15
Col3a1P08121 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC14.12□□□□□ -0.15
Col3a1P08121 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col3a1P08121 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Col3a1P08121 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col3a1P08121 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col3a1P08121 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Col3a1P08121 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col3a1P08121 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col3a1P08121 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col3a1P08121 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col3a1P08121 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col3a1P08121 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col3a1P08121 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col3a1P08121 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col3a1P08121 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.11□□□□□ -0.15
Col3a1P08121 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col3a1P08121 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col3a1P08121 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col3a1P08121 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col3a1P08121 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col3a1P08121 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col3a1P08121 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
Col3a1P08121 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.11□□□□□ -0.15
Col3a1P08121 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.11□□□□□ -0.15
Col3a1P08121 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col3a1P08121 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.11□□□□□ -0.15
Col3a1P08121 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col3a1P08121 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col3a1P08121 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col3a1P08121 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Col3a1P08121 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col3a1P08121 Gm26013-201ENSMUST00000104404 119 ntBASIC14.11□□□□□ -0.15
Col3a1P08121 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms