Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TnfP06804 Mir6546-201ENSMUST00000184460 62 ntBASIC12.68□□□□□ -0.38
TnfP06804 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.68□□□□□ -0.38
TnfP06804 Gm5714-201ENSMUST00000197343 566 ntBASIC12.68□□□□□ -0.38
TnfP06804 Mir7686-201ENSMUST00000200604 57 ntBASIC12.68□□□□□ -0.38
TnfP06804 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TnfP06804 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TnfP06804 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.68□□□□□ -0.38
TnfP06804 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TnfP06804 Gm6867-201ENSMUST00000219165 425 ntBASIC12.68□□□□□ -0.38
TnfP06804 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.68□□□□□ -0.38
TnfP06804 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.68□□□□□ -0.38
TnfP06804 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TnfP06804 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
TnfP06804 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
TnfP06804 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
TnfP06804 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
TnfP06804 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TnfP06804 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TnfP06804 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TnfP06804 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TnfP06804 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TnfP06804 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TnfP06804 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TnfP06804 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TnfP06804 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TnfP06804 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TnfP06804 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TnfP06804 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TnfP06804 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TnfP06804 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TnfP06804 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TnfP06804 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TnfP06804 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.67□□□□□ -0.38
TnfP06804 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TnfP06804 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TnfP06804 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
TnfP06804 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TnfP06804 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TnfP06804 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TnfP06804 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TnfP06804 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
TnfP06804 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
TnfP06804 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
TnfP06804 Gm12579-201ENSMUST00000118040 783 ntBASIC12.67□□□□□ -0.38
TnfP06804 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.67□□□□□ -0.38
TnfP06804 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TnfP06804 Gm24514-201ENSMUST00000174961 285 ntBASIC12.67□□□□□ -0.38
TnfP06804 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
TnfP06804 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TnfP06804 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.67□□□□□ -0.38
TnfP06804 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
TnfP06804 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TnfP06804 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TnfP06804 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TnfP06804 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TnfP06804 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TnfP06804 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TnfP06804 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TnfP06804 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TnfP06804 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TnfP06804 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TnfP06804 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TnfP06804 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TnfP06804 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TnfP06804 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TnfP06804 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TnfP06804 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.66□□□□□ -0.38
TnfP06804 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TnfP06804 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TnfP06804 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.66□□□□□ -0.38
TnfP06804 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TnfP06804 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TnfP06804 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TnfP06804 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
TnfP06804 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TnfP06804 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TnfP06804 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TnfP06804 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TnfP06804 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TnfP06804 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.66□□□□□ -0.38
TnfP06804 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.66□□□□□ -0.38
TnfP06804 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.66□□□□□ -0.38
TnfP06804 Gm19459-201ENSMUST00000176240 835 ntBASIC12.66□□□□□ -0.38
TnfP06804 Gm3508-201ENSMUST00000186012 792 ntBASIC12.66□□□□□ -0.38
TnfP06804 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TnfP06804 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.66□□□□□ -0.38
TnfP06804 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TnfP06804 Gm6450-201ENSMUST00000200896 574 ntBASIC12.66□□□□□ -0.38
TnfP06804 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.66□□□□□ -0.38
TnfP06804 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
TnfP06804 Gm45770-201ENSMUST00000212105 616 ntBASIC12.66□□□□□ -0.38
TnfP06804 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TnfP06804 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.66□□□□□ -0.38
TnfP06804 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.66□□□□□ -0.38
TnfP06804 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TnfP06804 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TnfP06804 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
TnfP06804 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
TnfP06804 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms