Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdgfrbP05622 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdgfrbP05622 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.15□□□□□ -0.46
PdgfrbP05622 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
PdgfrbP05622 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
PdgfrbP05622 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdgfrbP05622 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
PdgfrbP05622 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC12.15□□□□□ -0.46
PdgfrbP05622 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PdgfrbP05622 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdgfrbP05622 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PdgfrbP05622 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PdgfrbP05622 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PdgfrbP05622 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC12.15□□□□□ -0.46
PdgfrbP05622 AA914427-201ENSMUST00000193194 1166 ntBASIC12.15□□□□□ -0.46
PdgfrbP05622 Gm43438-201ENSMUST00000198133 379 ntBASIC12.15□□□□□ -0.46
PdgfrbP05622 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PdgfrbP05622 Gm19187-201ENSMUST00000206781 892 ntBASIC12.15□□□□□ -0.46
PdgfrbP05622 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.15□□□□□ -0.46
PdgfrbP05622 Gm45598-202ENSMUST00000210719 986 ntBASIC12.15□□□□□ -0.46
PdgfrbP05622 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC12.15□□□□□ -0.46
PdgfrbP05622 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC12.15□□□□□ -0.46
PdgfrbP05622 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdgfrbP05622 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdgfrbP05622 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdgfrbP05622 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdgfrbP05622 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
PdgfrbP05622 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdgfrbP05622 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdgfrbP05622 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.15□□□□□ -0.46
PdgfrbP05622 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.15□□□□□ -0.46
PdgfrbP05622 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdgfrbP05622 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdgfrbP05622 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
PdgfrbP05622 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdgfrbP05622 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdgfrbP05622 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.15□□□□□ -0.46
PdgfrbP05622 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.15□□□□□ -0.47
PdgfrbP05622 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
PdgfrbP05622 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PdgfrbP05622 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PdgfrbP05622 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PdgfrbP05622 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
PdgfrbP05622 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PdgfrbP05622 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
PdgfrbP05622 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
PdgfrbP05622 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
PdgfrbP05622 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
PdgfrbP05622 Gm18719-201ENSMUST00000196696 1413 ntBASIC12.14□□□□□ -0.47
PdgfrbP05622 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PdgfrbP05622 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
PdgfrbP05622 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PdgfrbP05622 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PdgfrbP05622 Gm5419-201ENSMUST00000119301 527 ntBASIC12.14□□□□□ -0.47
PdgfrbP05622 Gm12036-201ENSMUST00000120008 530 ntBASIC12.14□□□□□ -0.47
PdgfrbP05622 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PdgfrbP05622 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PdgfrbP05622 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PdgfrbP05622 Gm25700-201ENSMUST00000177693 110 ntBASIC12.14□□□□□ -0.47
PdgfrbP05622 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.14□□□□□ -0.47
PdgfrbP05622 Gm27320-201ENSMUST00000184892 109 ntBASIC12.14□□□□□ -0.47
PdgfrbP05622 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.14□□□□□ -0.47
PdgfrbP05622 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.14□□□□□ -0.47
PdgfrbP05622 Gm44967-201ENSMUST00000207047 631 ntBASIC12.14□□□□□ -0.47
PdgfrbP05622 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.14□□□□□ -0.47
PdgfrbP05622 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.14□□□□□ -0.47
PdgfrbP05622 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.14□□□□□ -0.47
PdgfrbP05622 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PdgfrbP05622 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PdgfrbP05622 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PdgfrbP05622 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PdgfrbP05622 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PdgfrbP05622 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PdgfrbP05622 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.14□□□□□ -0.47
PdgfrbP05622 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PdgfrbP05622 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PdgfrbP05622 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.14□□□□□ -0.47
PdgfrbP05622 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.13□□□□□ -0.47
PdgfrbP05622 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.13□□□□□ -0.47
PdgfrbP05622 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.13□□□□□ -0.47
PdgfrbP05622 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PdgfrbP05622 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PdgfrbP05622 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.13□□□□□ -0.47
PdgfrbP05622 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.13□□□□□ -0.47
PdgfrbP05622 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PdgfrbP05622 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PdgfrbP05622 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PdgfrbP05622 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PdgfrbP05622 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.13□□□□□ -0.47
PdgfrbP05622 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PdgfrbP05622 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
PdgfrbP05622 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PdgfrbP05622 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
PdgfrbP05622 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.13□□□□□ -0.47
PdgfrbP05622 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.13□□□□□ -0.47
PdgfrbP05622 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.13□□□□□ -0.47
PdgfrbP05622 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
PdgfrbP05622 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PdgfrbP05622 Gm15276-201ENSMUST00000145953 498 ntBASIC12.13□□□□□ -0.47
PdgfrbP05622 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms