Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.98□□□□□ -0.65
P01852 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
P01852 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
P01852 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
P01852 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
P01852 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
P01852 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
P01852 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
P01852 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
P01852 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
P01852 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
P01852 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
P01852 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
P01852 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.97□□□□□ -0.65
P01852 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
P01852 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
P01852 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.97□□□□□ -0.65
P01852 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
P01852 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
P01852 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.97□□□□□ -0.65
P01852 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.97□□□□□ -0.65
P01852 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
P01852 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC10.97□□□□□ -0.65
P01852 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
P01852 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
P01852 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.97□□□□□ -0.65
P01852 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC10.97□□□□□ -0.65
P01852 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.97□□□□□ -0.65
P01852 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.97□□□□□ -0.65
P01852 Gm43962-201ENSMUST00000203898 190 ntBASIC10.97□□□□□ -0.65
P01852 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.97□□□□□ -0.65
P01852 Gm45433-201ENSMUST00000209386 247 ntBASIC10.97□□□□□ -0.65
P01852 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.97□□□□□ -0.65
P01852 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
P01852 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.97□□□□□ -0.65
P01852 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.97□□□□□ -0.65
P01852 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
P01852 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01852 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
P01852 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01852 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01852 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
P01852 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
P01852 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01852 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01852 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01852 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01852 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01852 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01852 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01852 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01852 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.96□□□□□ -0.65
P01852 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.96□□□□□ -0.65
P01852 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
P01852 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
P01852 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01852 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01852 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01852 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
P01852 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01852 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.96□□□□□ -0.65
P01852 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.96□□□□□ -0.65
P01852 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
P01852 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.96□□□□□ -0.65
P01852 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.96□□□□□ -0.65
P01852 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.96□□□□□ -0.65
P01852 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
P01852 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01852 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
P01852 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms