Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.32□□□□□ -0.44
CopeO89079 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.32□□□□□ -0.44
CopeO89079 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.32□□□□□ -0.44
CopeO89079 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.32□□□□□ -0.44
CopeO89079 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.32□□□□□ -0.44
CopeO89079 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.32□□□□□ -0.44
CopeO89079 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.32□□□□□ -0.44
CopeO89079 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CopeO89079 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CopeO89079 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.32□□□□□ -0.44
CopeO89079 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CopeO89079 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CopeO89079 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CopeO89079 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CopeO89079 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopeO89079 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopeO89079 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopeO89079 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CopeO89079 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CopeO89079 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CopeO89079 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopeO89079 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopeO89079 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.31□□□□□ -0.44
CopeO89079 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopeO89079 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CopeO89079 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopeO89079 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CopeO89079 Gm15610-201ENSMUST00000120584 195 ntBASIC12.31□□□□□ -0.44
CopeO89079 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.31□□□□□ -0.44
CopeO89079 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CopeO89079 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.31□□□□□ -0.44
CopeO89079 Gm28882-201ENSMUST00000185504 314 ntBASIC12.31□□□□□ -0.44
CopeO89079 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopeO89079 Gm17931-201ENSMUST00000208132 634 ntBASIC12.31□□□□□ -0.44
CopeO89079 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CopeO89079 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.31□□□□□ -0.44
CopeO89079 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.31□□□□□ -0.44
CopeO89079 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.31□□□□□ -0.44
CopeO89079 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CopeO89079 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopeO89079 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopeO89079 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CopeO89079 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopeO89079 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopeO89079 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopeO89079 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CopeO89079 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CopeO89079 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopeO89079 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CopeO89079 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.31□□□□□ -0.44
CopeO89079 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CopeO89079 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopeO89079 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopeO89079 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.3□□□□□ -0.44
CopeO89079 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CopeO89079 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.3□□□□□ -0.44
CopeO89079 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.3□□□□□ -0.44
CopeO89079 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopeO89079 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopeO89079 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CopeO89079 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopeO89079 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CopeO89079 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.3□□□□□ -0.44
CopeO89079 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.3□□□□□ -0.44
CopeO89079 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
CopeO89079 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopeO89079 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.3□□□□□ -0.44
CopeO89079 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.3□□□□□ -0.44
CopeO89079 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CopeO89079 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CopeO89079 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CopeO89079 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopeO89079 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopeO89079 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopeO89079 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopeO89079 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CopeO89079 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms