Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Matn4O89029 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.28□□□□□ -0.6
Matn4O89029 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Matn4O89029 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Matn4O89029 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Matn4O89029 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Matn4O89029 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Matn4O89029 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Matn4O89029 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Matn4O89029 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Matn4O89029 BC043934-202ENSMUST00000185694 2356 ntBASIC11.27□□□□□ -0.6
Matn4O89029 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Matn4O89029 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Matn4O89029 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.27□□□□□ -0.6
Matn4O89029 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Matn4O89029 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Matn4O89029 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.27□□□□□ -0.61
Matn4O89029 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Matn4O89029 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Matn4O89029 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Matn4O89029 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Matn4O89029 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Matn4O89029 Gm10434-201ENSMUST00000101158 471 ntBASIC11.27□□□□□ -0.61
Matn4O89029 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Matn4O89029 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Matn4O89029 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.27□□□□□ -0.61
Matn4O89029 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.27□□□□□ -0.61
Matn4O89029 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Matn4O89029 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Matn4O89029 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Matn4O89029 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.27□□□□□ -0.61
Matn4O89029 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.27□□□□□ -0.61
Matn4O89029 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.27□□□□□ -0.61
Matn4O89029 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.27□□□□□ -0.61
Matn4O89029 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.27□□□□□ -0.61
Matn4O89029 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Matn4O89029 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Matn4O89029 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Matn4O89029 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Matn4O89029 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Matn4O89029 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Matn4O89029 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Matn4O89029 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Matn4O89029 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Matn4O89029 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Matn4O89029 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.27□□□□□ -0.61
Matn4O89029 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Matn4O89029 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.27□□□□□ -0.61
Matn4O89029 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Matn4O89029 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Matn4O89029 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Matn4O89029 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Matn4O89029 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Matn4O89029 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Matn4O89029 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Matn4O89029 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn4O89029 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Matn4O89029 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn4O89029 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Matn4O89029 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn4O89029 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn4O89029 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Matn4O89029 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.26□□□□□ -0.61
Matn4O89029 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn4O89029 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Matn4O89029 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Matn4O89029 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Matn4O89029 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Matn4O89029 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Matn4O89029 Gm6023-201ENSMUST00000118217 606 ntBASIC11.26□□□□□ -0.61
Matn4O89029 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.26□□□□□ -0.61
Matn4O89029 Gm7722-201ENSMUST00000120646 741 ntBASIC11.26□□□□□ -0.61
Matn4O89029 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.26□□□□□ -0.61
Matn4O89029 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Matn4O89029 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.26□□□□□ -0.61
Matn4O89029 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.26□□□□□ -0.61
Matn4O89029 Gm9192-201ENSMUST00000183221 985 ntBASIC11.26□□□□□ -0.61
Matn4O89029 Gm27731-201ENSMUST00000185192 107 ntBASIC11.26□□□□□ -0.61
Matn4O89029 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.26□□□□□ -0.61
Matn4O89029 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.26□□□□□ -0.61
Matn4O89029 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.26□□□□□ -0.61
Matn4O89029 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn4O89029 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn4O89029 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Matn4O89029 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn4O89029 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Matn4O89029 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Matn4O89029 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Matn4O89029 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn4O89029 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn4O89029 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn4O89029 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Matn4O89029 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.26□□□□□ -0.61
Matn4O89029 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Matn4O89029 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Matn4O89029 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.26□□□□□ -0.61
Matn4O89029 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.25□□□□□ -0.61
Matn4O89029 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Matn4O89029 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Matn4O89029 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 169 ms