Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.79□□□□□ -0.52
ClppO88696 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClppO88696 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.79□□□□□ -0.52
ClppO88696 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ClppO88696 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.79□□□□□ -0.52
ClppO88696 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ClppO88696 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClppO88696 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
ClppO88696 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
ClppO88696 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.79□□□□□ -0.52
ClppO88696 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.79□□□□□ -0.52
ClppO88696 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.79□□□□□ -0.52
ClppO88696 Gm12217-201ENSMUST00000118858 696 ntBASIC11.79□□□□□ -0.52
ClppO88696 Gm12266-201ENSMUST00000120311 962 ntBASIC11.79□□□□□ -0.52
ClppO88696 Gm11597-201ENSMUST00000121423 964 ntBASIC11.79□□□□□ -0.52
ClppO88696 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.79□□□□□ -0.52
ClppO88696 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClppO88696 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ClppO88696 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ClppO88696 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.79□□□□□ -0.52
ClppO88696 Mir6927-201ENSMUST00000184494 71 ntBASIC11.79□□□□□ -0.52
ClppO88696 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.79□□□□□ -0.52
ClppO88696 Gm43378-201ENSMUST00000199336 582 ntBASIC11.79□□□□□ -0.52
ClppO88696 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.79□□□□□ -0.52
ClppO88696 Gm44262-201ENSMUST00000204969 372 ntBASIC11.79□□□□□ -0.52
ClppO88696 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.79□□□□□ -0.52
ClppO88696 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.79□□□□□ -0.52
ClppO88696 Gm39404-201ENSMUST00000216350 313 ntBASIC11.79□□□□□ -0.52
ClppO88696 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.79□□□□□ -0.52
ClppO88696 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClppO88696 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClppO88696 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClppO88696 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ClppO88696 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
ClppO88696 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClppO88696 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClppO88696 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
ClppO88696 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ClppO88696 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ClppO88696 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ClppO88696 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ClppO88696 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClppO88696 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
ClppO88696 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
ClppO88696 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClppO88696 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClppO88696 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
ClppO88696 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClppO88696 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClppO88696 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClppO88696 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ClppO88696 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClppO88696 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClppO88696 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClppO88696 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClppO88696 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClppO88696 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
ClppO88696 Gm6092-201ENSMUST00000121659 2029 ntBASIC11.78□□□□□ -0.52
ClppO88696 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClppO88696 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClppO88696 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClppO88696 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ClppO88696 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.78□□□□□ -0.52
ClppO88696 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.78□□□□□ -0.52
ClppO88696 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ClppO88696 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClppO88696 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
ClppO88696 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClppO88696 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClppO88696 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClppO88696 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
ClppO88696 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClppO88696 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ClppO88696 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClppO88696 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClppO88696 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClppO88696 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClppO88696 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClppO88696 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
ClppO88696 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClppO88696 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
ClppO88696 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
ClppO88696 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
ClppO88696 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
ClppO88696 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
ClppO88696 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
ClppO88696 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
ClppO88696 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
ClppO88696 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
ClppO88696 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
ClppO88696 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
ClppO88696 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClppO88696 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ClppO88696 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.77□□□□□ -0.53
ClppO88696 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.77□□□□□ -0.53
ClppO88696 Gm12566-201ENSMUST00000121479 359 ntBASIC11.77□□□□□ -0.53
ClppO88696 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.77□□□□□ -0.53
ClppO88696 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ClppO88696 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ClppO88696 Gm17040-202ENSMUST00000170597 889 ntBASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms