Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm12274-201ENSMUST00000120062 385 ntBASIC15.24■□□□□ 0.03
Ubr1O70481 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC15.24■□□□□ 0.03
Ubr1O70481 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ubr1O70481 Gm29067-201ENSMUST00000190821 470 ntBASIC15.24■□□□□ 0.03
Ubr1O70481 Gm37638-201ENSMUST00000194337 1123 ntBASIC15.24■□□□□ 0.03
Ubr1O70481 Gm42655-201ENSMUST00000202782 1134 ntBASIC15.24■□□□□ 0.03
Ubr1O70481 AC122891.1-201ENSMUST00000218671 268 ntBASIC15.24■□□□□ 0.03
Ubr1O70481 Gm7959-201ENSMUST00000221823 1078 ntBASIC15.24■□□□□ 0.03
Ubr1O70481 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ubr1O70481 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ubr1O70481 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ubr1O70481 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Ubr1O70481 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ubr1O70481 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ubr1O70481 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ubr1O70481 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ubr1O70481 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ubr1O70481 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ubr1O70481 Gm18798-201ENSMUST00000187264 1700 ntBASIC15.24■□□□□ 0.03
Ubr1O70481 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ubr1O70481 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ubr1O70481 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ubr1O70481 Gm11700-201ENSMUST00000119409 403 ntBASIC15.24■□□□□ 0.03
Ubr1O70481 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ubr1O70481 Gm13284-201ENSMUST00000121020 547 ntBASIC15.24■□□□□ 0.03
Ubr1O70481 Gm24248-201ENSMUST00000157321 322 ntBASIC15.24■□□□□ 0.03
Ubr1O70481 Gm24809-201ENSMUST00000175318 271 ntBASIC15.24■□□□□ 0.03
Ubr1O70481 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC15.24■□□□□ 0.03
Ubr1O70481 Gm26982-201ENSMUST00000182250 1151 ntBASIC15.24■□□□□ 0.03
Ubr1O70481 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC15.24■□□□□ 0.03
Ubr1O70481 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC15.24■□□□□ 0.03
Ubr1O70481 Gm28833-201ENSMUST00000189671 559 ntBASIC15.24■□□□□ 0.03
Ubr1O70481 Gm43163-201ENSMUST00000196571 442 ntBASIC15.24■□□□□ 0.03
Ubr1O70481 Mt1-202ENSMUST00000211807 1085 ntBASIC15.24■□□□□ 0.03
Ubr1O70481 Gm19046-201ENSMUST00000221263 1298 ntBASIC15.24■□□□□ 0.03
Ubr1O70481 CT573086.4-201ENSMUST00000226729 342 ntBASIC15.24■□□□□ 0.03
Ubr1O70481 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ubr1O70481 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ubr1O70481 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr1O70481 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ubr1O70481 Gm43365-201ENSMUST00000196522 2106 ntBASIC15.23■□□□□ 0.03
Ubr1O70481 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr1O70481 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr1O70481 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr1O70481 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.23■□□□□ 0.03
Ubr1O70481 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr1O70481 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr1O70481 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr1O70481 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr1O70481 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Ubr1O70481 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC15.23■□□□□ 0.03
Ubr1O70481 Gm9369-201ENSMUST00000196009 733 ntBASIC15.23■□□□□ 0.03
Ubr1O70481 Gm43671-201ENSMUST00000200422 433 ntBASIC15.23■□□□□ 0.03
Ubr1O70481 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC15.23■□□□□ 0.03
Ubr1O70481 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr1O70481 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr1O70481 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr1O70481 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC15.23■□□□□ 0.03
Ubr1O70481 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr1O70481 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr1O70481 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr1O70481 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr1O70481 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr1O70481 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC15.22■□□□□ 0.03
Ubr1O70481 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr1O70481 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr1O70481 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr1O70481 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr1O70481 Gm12389-201ENSMUST00000117696 418 ntBASIC15.22■□□□□ 0.03
Ubr1O70481 Gm14213-201ENSMUST00000119778 768 ntBASIC15.22■□□□□ 0.03
Ubr1O70481 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC15.22■□□□□ 0.03
Ubr1O70481 Olfml3-204ENSMUST00000169286 874 ntBASIC15.22■□□□□ 0.03
Ubr1O70481 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr1O70481 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC15.22■□□□□ 0.03
Ubr1O70481 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC15.22■□□□□ 0.03
Ubr1O70481 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr1O70481 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr1O70481 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr1O70481 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr1O70481 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr1O70481 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ubr1O70481 Gm5171-201ENSMUST00000214944 1415 ntBASIC15.22■□□□□ 0.03
Ubr1O70481 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr1O70481 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr1O70481 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC15.22■□□□□ 0.03
Ubr1O70481 Gm37122-201ENSMUST00000195313 1567 ntBASIC15.22■□□□□ 0.03
Ubr1O70481 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr1O70481 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr1O70481 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr1O70481 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC15.22■□□□□ 0.03
Ubr1O70481 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ubr1O70481 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ubr1O70481 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC15.21■□□□□ 0.03
Ubr1O70481 Gm22379-201ENSMUST00000157480 131 ntBASIC15.21■□□□□ 0.03
Ubr1O70481 Gm20414-201ENSMUST00000172918 646 ntBASIC15.21■□□□□ 0.03
Ubr1O70481 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC15.21■□□□□ 0.03
Ubr1O70481 Gm34379-201ENSMUST00000195036 290 ntBASIC15.21■□□□□ 0.03
Ubr1O70481 Gm45758-201ENSMUST00000212448 1006 ntBASIC15.21■□□□□ 0.03
Ubr1O70481 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubr1O70481 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms