Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl13O55038 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl13O55038 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl13O55038 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.12□□□□□ -0.79
Cxcl13O55038 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Cxcl13O55038 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl13O55038 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl13O55038 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl13O55038 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl13O55038 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl13O55038 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl13O55038 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl13O55038 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl13O55038 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl13O55038 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl13O55038 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Cxcl13O55038 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.12□□□□□ -0.79
Cxcl13O55038 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl13O55038 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl13O55038 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl13O55038 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl13O55038 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl13O55038 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl13O55038 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.11□□□□□ -0.79
Cxcl13O55038 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.11□□□□□ -0.79
Cxcl13O55038 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl13O55038 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl13O55038 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.11□□□□□ -0.79
Cxcl13O55038 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl13O55038 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl13O55038 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl13O55038 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl13O55038 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Cxcl13O55038 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl13O55038 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl13O55038 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl13O55038 Gm15573-201ENSMUST00000119487 540 ntBASIC10.11□□□□□ -0.79
Cxcl13O55038 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.11□□□□□ -0.79
Cxcl13O55038 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.11□□□□□ -0.79
Cxcl13O55038 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Cxcl13O55038 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl13O55038 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.11□□□□□ -0.79
Cxcl13O55038 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.11□□□□□ -0.79
Cxcl13O55038 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
Cxcl13O55038 Gm29499-201ENSMUST00000189151 486 ntBASIC10.11□□□□□ -0.79
Cxcl13O55038 Gm28329-201ENSMUST00000191208 689 ntBASIC10.11□□□□□ -0.79
Cxcl13O55038 Gm29171-201ENSMUST00000191397 486 ntBASIC10.11□□□□□ -0.79
Cxcl13O55038 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
Cxcl13O55038 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Cxcl13O55038 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl13O55038 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl13O55038 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl13O55038 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Cxcl13O55038 Gm10179-201ENSMUST00000086233 688 ntBASIC10.11□□□□□ -0.79
Cxcl13O55038 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC10.11□□□□□ -0.79
Cxcl13O55038 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Cxcl13O55038 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Cxcl13O55038 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl13O55038 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl13O55038 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl13O55038 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl13O55038 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl13O55038 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl13O55038 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl13O55038 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl13O55038 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl13O55038 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Cxcl13O55038 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Cxcl13O55038 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl13O55038 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl13O55038 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl13O55038 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
Cxcl13O55038 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl13O55038 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Cxcl13O55038 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
Cxcl13O55038 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl13O55038 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl13O55038 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl13O55038 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Cxcl13O55038 Gm7666-201ENSMUST00000146631 819 ntBASIC10.1□□□□□ -0.79
Cxcl13O55038 Gm15881-201ENSMUST00000148792 942 ntBASIC10.1□□□□□ -0.79
Cxcl13O55038 Gm22144-201ENSMUST00000157402 102 ntBASIC10.1□□□□□ -0.79
Cxcl13O55038 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.1□□□□□ -0.79
Cxcl13O55038 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC10.1□□□□□ -0.79
Cxcl13O55038 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl13O55038 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Cxcl13O55038 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC10.1□□□□□ -0.79
Cxcl13O55038 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC10.1□□□□□ -0.79
Cxcl13O55038 Gm5051-201ENSMUST00000204085 485 ntBASIC10.1□□□□□ -0.79
Cxcl13O55038 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.1□□□□□ -0.79
Cxcl13O55038 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC10.1□□□□□ -0.79
Cxcl13O55038 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl13O55038 AC166992.1-201ENSMUST00000216356 565 ntBASIC10.1□□□□□ -0.79
Cxcl13O55038 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC10.1□□□□□ -0.79
Cxcl13O55038 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.1□□□□□ -0.79
Cxcl13O55038 Gm6781-201ENSMUST00000038304 1242 ntBASIC10.1□□□□□ -0.79
Cxcl13O55038 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Cxcl13O55038 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl13O55038 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl13O55038 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms