Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarce1O54941 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smarce1O54941 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarce1O54941 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarce1O54941 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarce1O54941 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.2□□□□□ -0.14
Smarce1O54941 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarce1O54941 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.2□□□□□ -0.14
Smarce1O54941 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarce1O54941 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.2□□□□□ -0.14
Smarce1O54941 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Smarce1O54941 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.2□□□□□ -0.14
Smarce1O54941 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.2□□□□□ -0.14
Smarce1O54941 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.2□□□□□ -0.14
Smarce1O54941 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarce1O54941 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarce1O54941 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarce1O54941 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Smarce1O54941 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarce1O54941 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC14.2□□□□□ -0.14
Smarce1O54941 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarce1O54941 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarce1O54941 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarce1O54941 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smarce1O54941 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smarce1O54941 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarce1O54941 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarce1O54941 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarce1O54941 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC14.19□□□□□ -0.14
Smarce1O54941 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarce1O54941 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Smarce1O54941 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarce1O54941 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarce1O54941 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarce1O54941 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Smarce1O54941 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarce1O54941 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarce1O54941 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarce1O54941 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Smarce1O54941 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Smarce1O54941 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarce1O54941 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarce1O54941 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarce1O54941 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarce1O54941 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarce1O54941 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarce1O54941 Snora78-201ENSMUST00000158630 128 ntBASIC14.19□□□□□ -0.14
Smarce1O54941 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Smarce1O54941 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.19□□□□□ -0.14
Smarce1O54941 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.19□□□□□ -0.14
Smarce1O54941 Gm43133-201ENSMUST00000197472 463 ntBASIC14.19□□□□□ -0.14
Smarce1O54941 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Smarce1O54941 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.19□□□□□ -0.14
Smarce1O54941 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.19□□□□□ -0.14
Smarce1O54941 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarce1O54941 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Smarce1O54941 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Smarce1O54941 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarce1O54941 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarce1O54941 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarce1O54941 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarce1O54941 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarce1O54941 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarce1O54941 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarce1O54941 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarce1O54941 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC14.19□□□□□ -0.14
Smarce1O54941 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarce1O54941 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC14.19□□□□□ -0.14
Smarce1O54941 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Smarce1O54941 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Smarce1O54941 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarce1O54941 AC167022.1-201ENSMUST00000218647 1458 ntBASIC14.18□□□□□ -0.14
Smarce1O54941 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarce1O54941 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarce1O54941 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarce1O54941 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarce1O54941 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarce1O54941 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarce1O54941 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.18□□□□□ -0.14
Smarce1O54941 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarce1O54941 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarce1O54941 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarce1O54941 Gm22018-201ENSMUST00000104357 131 ntBASIC14.18□□□□□ -0.14
Smarce1O54941 Gm14441-201ENSMUST00000121960 540 ntBASIC14.18□□□□□ -0.14
Smarce1O54941 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarce1O54941 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarce1O54941 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarce1O54941 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarce1O54941 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC14.18□□□□□ -0.14
Smarce1O54941 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarce1O54941 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarce1O54941 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarce1O54941 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Smarce1O54941 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC14.18□□□□□ -0.14
Smarce1O54941 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Smarce1O54941 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Smarce1O54941 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarce1O54941 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarce1O54941 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarce1O54941 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms