Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm8199-201ENSMUST00000121323 823 ntBASIC12.33□□□□□ -0.44
Sdc4O35988 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.33□□□□□ -0.44
Sdc4O35988 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.33□□□□□ -0.44
Sdc4O35988 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.33□□□□□ -0.44
Sdc4O35988 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Sdc4O35988 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc4O35988 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.33□□□□□ -0.44
Sdc4O35988 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
Sdc4O35988 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc4O35988 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.33□□□□□ -0.44
Sdc4O35988 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.33□□□□□ -0.44
Sdc4O35988 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.33□□□□□ -0.44
Sdc4O35988 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc4O35988 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.33□□□□□ -0.44
Sdc4O35988 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc4O35988 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Sdc4O35988 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc4O35988 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Sdc4O35988 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.33□□□□□ -0.44
Sdc4O35988 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.33□□□□□ -0.44
Sdc4O35988 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
Sdc4O35988 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc4O35988 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc4O35988 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc4O35988 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc4O35988 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.33□□□□□ -0.44
Sdc4O35988 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Sdc4O35988 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.32□□□□□ -0.44
Sdc4O35988 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc4O35988 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc4O35988 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc4O35988 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc4O35988 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.32□□□□□ -0.44
Sdc4O35988 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc4O35988 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc4O35988 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc4O35988 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc4O35988 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc4O35988 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc4O35988 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.32□□□□□ -0.44
Sdc4O35988 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.32□□□□□ -0.44
Sdc4O35988 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc4O35988 Gm22334-201ENSMUST00000158070 133 ntBASIC12.32□□□□□ -0.44
Sdc4O35988 Mir1943-201ENSMUST00000158276 73 ntBASIC12.32□□□□□ -0.44
Sdc4O35988 Gm9550-201ENSMUST00000161130 862 ntBASIC12.32□□□□□ -0.44
Sdc4O35988 Gm8815-201ENSMUST00000173809 620 ntBASIC12.32□□□□□ -0.44
Sdc4O35988 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.32□□□□□ -0.44
Sdc4O35988 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.32□□□□□ -0.44
Sdc4O35988 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sdc4O35988 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.32□□□□□ -0.44
Sdc4O35988 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc4O35988 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc4O35988 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc4O35988 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sdc4O35988 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.32□□□□□ -0.44
Sdc4O35988 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc4O35988 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc4O35988 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc4O35988 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.32□□□□□ -0.44
Sdc4O35988 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc4O35988 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc4O35988 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc4O35988 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc4O35988 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc4O35988 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc4O35988 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc4O35988 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sdc4O35988 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc4O35988 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.31□□□□□ -0.44
Sdc4O35988 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc4O35988 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sdc4O35988 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Sdc4O35988 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc4O35988 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc4O35988 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc4O35988 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc4O35988 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc4O35988 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.31□□□□□ -0.44
Sdc4O35988 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc4O35988 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc4O35988 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.31□□□□□ -0.44
Sdc4O35988 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc4O35988 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.31□□□□□ -0.44
Sdc4O35988 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc4O35988 Gm13809-201ENSMUST00000117921 597 ntBASIC12.31□□□□□ -0.44
Sdc4O35988 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.31□□□□□ -0.44
Sdc4O35988 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.31□□□□□ -0.44
Sdc4O35988 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc4O35988 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc4O35988 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Sdc4O35988 Gm10051-201ENSMUST00000145209 414 ntBASIC12.31□□□□□ -0.44
Sdc4O35988 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc4O35988 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc4O35988 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.31□□□□□ -0.44
Sdc4O35988 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.31□□□□□ -0.44
Sdc4O35988 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.31□□□□□ -0.44
Sdc4O35988 Ginm1-202ENSMUST00000065124 300 ntBASIC12.31□□□□□ -0.44
Sdc4O35988 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc4O35988 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Sdc4O35988 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms