Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm17040-202ENSMUST00000170597 889 ntBASIC11.71□□□□□ -0.53
Npc1O35604 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.71□□□□□ -0.53
Npc1O35604 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.71□□□□□ -0.53
Npc1O35604 Gm26461-201ENSMUST00000175064 290 ntBASIC11.71□□□□□ -0.53
Npc1O35604 Gm4034-201ENSMUST00000187674 480 ntBASIC11.71□□□□□ -0.53
Npc1O35604 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.71□□□□□ -0.53
Npc1O35604 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.71□□□□□ -0.53
Npc1O35604 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.71□□□□□ -0.53
Npc1O35604 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Npc1O35604 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Npc1O35604 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Npc1O35604 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Npc1O35604 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Npc1O35604 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Npc1O35604 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.71□□□□□ -0.54
Npc1O35604 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Npc1O35604 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Npc1O35604 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Npc1O35604 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Npc1O35604 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Npc1O35604 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Npc1O35604 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Npc1O35604 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Npc1O35604 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Npc1O35604 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Npc1O35604 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npc1O35604 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npc1O35604 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npc1O35604 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npc1O35604 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Npc1O35604 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.7□□□□□ -0.54
Npc1O35604 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npc1O35604 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Npc1O35604 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Npc1O35604 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Npc1O35604 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npc1O35604 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npc1O35604 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Npc1O35604 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npc1O35604 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.7□□□□□ -0.54
Npc1O35604 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.7□□□□□ -0.54
Npc1O35604 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.7□□□□□ -0.54
Npc1O35604 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Npc1O35604 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.7□□□□□ -0.54
Npc1O35604 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Npc1O35604 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Npc1O35604 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Npc1O35604 Gm37666-201ENSMUST00000194110 866 ntBASIC11.7□□□□□ -0.54
Npc1O35604 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Npc1O35604 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npc1O35604 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.7□□□□□ -0.54
Npc1O35604 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Npc1O35604 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.7□□□□□ -0.54
Npc1O35604 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npc1O35604 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npc1O35604 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Npc1O35604 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npc1O35604 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Npc1O35604 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Npc1O35604 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Npc1O35604 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npc1O35604 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npc1O35604 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npc1O35604 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npc1O35604 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npc1O35604 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Npc1O35604 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npc1O35604 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npc1O35604 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.7□□□□□ -0.54
Npc1O35604 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Npc1O35604 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npc1O35604 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npc1O35604 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npc1O35604 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npc1O35604 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npc1O35604 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npc1O35604 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npc1O35604 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Npc1O35604 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npc1O35604 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npc1O35604 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npc1O35604 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npc1O35604 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npc1O35604 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npc1O35604 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npc1O35604 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npc1O35604 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Npc1O35604 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.69□□□□□ -0.54
Npc1O35604 Mir7677-201ENSMUST00000184226 67 ntBASIC11.69□□□□□ -0.54
Npc1O35604 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.69□□□□□ -0.54
Npc1O35604 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.69□□□□□ -0.54
Npc1O35604 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.69□□□□□ -0.54
Npc1O35604 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npc1O35604 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Npc1O35604 Gm5455-201ENSMUST00000058710 715 ntBASIC11.69□□□□□ -0.54
Npc1O35604 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npc1O35604 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npc1O35604 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.69□□□□□ -0.54
Npc1O35604 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npc1O35604 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms