Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc1a6O35544 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc1a6O35544 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc1a6O35544 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc1a6O35544 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc1a6O35544 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc1a6O35544 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.78□□□□□ -0.52
Slc1a6O35544 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc1a6O35544 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc1a6O35544 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Slc1a6O35544 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Slc1a6O35544 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Slc1a6O35544 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Slc1a6O35544 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Slc1a6O35544 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Slc1a6O35544 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.77□□□□□ -0.52
Slc1a6O35544 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Slc1a6O35544 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Slc1a6O35544 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.77□□□□□ -0.52
Slc1a6O35544 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Slc1a6O35544 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Slc1a6O35544 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Slc1a6O35544 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Slc1a6O35544 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Slc1a6O35544 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Slc1a6O35544 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc1a6O35544 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc1a6O35544 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc1a6O35544 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Slc1a6O35544 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc1a6O35544 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.77□□□□□ -0.53
Slc1a6O35544 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.77□□□□□ -0.53
Slc1a6O35544 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc1a6O35544 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.77□□□□□ -0.53
Slc1a6O35544 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc1a6O35544 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc1a6O35544 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc1a6O35544 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc1a6O35544 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Slc1a6O35544 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc1a6O35544 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc1a6O35544 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc1a6O35544 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc1a6O35544 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Slc1a6O35544 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Slc1a6O35544 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.77□□□□□ -0.53
Slc1a6O35544 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc1a6O35544 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Slc1a6O35544 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc1a6O35544 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc1a6O35544 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc1a6O35544 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Slc1a6O35544 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Slc1a6O35544 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc1a6O35544 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc1a6O35544 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc1a6O35544 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.76□□□□□ -0.53
Slc1a6O35544 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc1a6O35544 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Slc1a6O35544 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc1a6O35544 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.76□□□□□ -0.53
Slc1a6O35544 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc1a6O35544 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.76□□□□□ -0.53
Slc1a6O35544 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.76□□□□□ -0.53
Slc1a6O35544 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.76□□□□□ -0.53
Slc1a6O35544 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.76□□□□□ -0.53
Slc1a6O35544 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Slc1a6O35544 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Slc1a6O35544 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Slc1a6O35544 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc1a6O35544 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Slc1a6O35544 Gm5035-201ENSMUST00000215581 927 ntBASIC11.76□□□□□ -0.53
Slc1a6O35544 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.76□□□□□ -0.53
Slc1a6O35544 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Slc1a6O35544 Rgr-203ENSMUST00000225070 4704 ntBASIC11.76□□□□□ -0.53
Slc1a6O35544 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc1a6O35544 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc1a6O35544 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Slc1a6O35544 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Slc1a6O35544 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Slc1a6O35544 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.76□□□□□ -0.53
Slc1a6O35544 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc1a6O35544 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc1a6O35544 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.76□□□□□ -0.53
Slc1a6O35544 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc1a6O35544 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc1a6O35544 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Slc1a6O35544 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc1a6O35544 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc1a6O35544 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Slc1a6O35544 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc1a6O35544 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.75□□□□□ -0.53
Slc1a6O35544 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc1a6O35544 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.75□□□□□ -0.53
Slc1a6O35544 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc1a6O35544 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Slc1a6O35544 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.75□□□□□ -0.53
Slc1a6O35544 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc1a6O35544 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc1a6O35544 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms