Protein–RNA interactions for Protein: O09113

Otp, Homeobox protein orthopedia, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtpO09113 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
OtpO09113 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
OtpO09113 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
OtpO09113 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
OtpO09113 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
OtpO09113 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.65□□□□□ -0.7
OtpO09113 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.65□□□□□ -0.7
OtpO09113 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.65□□□□□ -0.7
OtpO09113 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
OtpO09113 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
OtpO09113 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
OtpO09113 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
OtpO09113 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
OtpO09113 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
OtpO09113 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
OtpO09113 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
OtpO09113 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
OtpO09113 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
OtpO09113 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
OtpO09113 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.65□□□□□ -0.7
OtpO09113 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.65□□□□□ -0.7
OtpO09113 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.65□□□□□ -0.7
OtpO09113 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
OtpO09113 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
OtpO09113 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.65□□□□□ -0.7
OtpO09113 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.65□□□□□ -0.7
OtpO09113 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
OtpO09113 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.65□□□□□ -0.7
OtpO09113 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
OtpO09113 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.65□□□□□ -0.7
OtpO09113 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.65□□□□□ -0.7
OtpO09113 Gm7399-201ENSMUST00000032395 858 ntBASIC10.65□□□□□ -0.7
OtpO09113 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
OtpO09113 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
OtpO09113 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
OtpO09113 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
OtpO09113 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
OtpO09113 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
OtpO09113 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
OtpO09113 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
OtpO09113 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
OtpO09113 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
OtpO09113 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
OtpO09113 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
OtpO09113 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
OtpO09113 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
OtpO09113 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
OtpO09113 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
OtpO09113 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
OtpO09113 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
OtpO09113 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
OtpO09113 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.64□□□□□ -0.71
OtpO09113 Erich3-203ENSMUST00000189969 3460 ntBASIC10.64□□□□□ -0.71
OtpO09113 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
OtpO09113 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
OtpO09113 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
OtpO09113 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
OtpO09113 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
OtpO09113 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
OtpO09113 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
OtpO09113 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.64□□□□□ -0.71
OtpO09113 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.64□□□□□ -0.71
OtpO09113 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
OtpO09113 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
OtpO09113 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
OtpO09113 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
OtpO09113 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
OtpO09113 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
OtpO09113 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.64□□□□□ -0.71
OtpO09113 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
OtpO09113 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.64□□□□□ -0.71
OtpO09113 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
OtpO09113 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
OtpO09113 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
OtpO09113 Gm26956-201ENSMUST00000182176 986 ntBASIC10.64□□□□□ -0.71
OtpO09113 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.64□□□□□ -0.71
OtpO09113 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
OtpO09113 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.64□□□□□ -0.71
OtpO09113 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
OtpO09113 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.64□□□□□ -0.71
OtpO09113 Gm5186-201ENSMUST00000218781 920 ntBASIC10.64□□□□□ -0.71
OtpO09113 Cts7-204ENSMUST00000225321 1257 ntBASIC10.64□□□□□ -0.71
OtpO09113 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
OtpO09113 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.64□□□□□ -0.71
OtpO09113 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
OtpO09113 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
OtpO09113 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
OtpO09113 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
OtpO09113 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
OtpO09113 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
OtpO09113 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
OtpO09113 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
OtpO09113 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.64□□□□□ -0.71
OtpO09113 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
OtpO09113 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.64□□□□□ -0.71
OtpO09113 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
OtpO09113 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
OtpO09113 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
OtpO09113 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
OtpO09113 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms