Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcf11G3X9Z4 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcf11G3X9Z4 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcf11G3X9Z4 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcf11G3X9Z4 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcf11G3X9Z4 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcf11G3X9Z4 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcf11G3X9Z4 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcf11G3X9Z4 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcf11G3X9Z4 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcf11G3X9Z4 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcf11G3X9Z4 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC17.83■□□□□ 0.45
Pcf11G3X9Z4 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC17.83■□□□□ 0.45
Pcf11G3X9Z4 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcf11G3X9Z4 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC17.83■□□□□ 0.45
Pcf11G3X9Z4 Gm7082-201ENSMUST00000209880 969 ntBASIC17.83■□□□□ 0.45
Pcf11G3X9Z4 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Pcf11G3X9Z4 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Pcf11G3X9Z4 AC165154.1-201ENSMUST00000226661 340 ntBASIC17.83■□□□□ 0.45
Pcf11G3X9Z4 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcf11G3X9Z4 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Pcf11G3X9Z4 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcf11G3X9Z4 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcf11G3X9Z4 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Pcf11G3X9Z4 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcf11G3X9Z4 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcf11G3X9Z4 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Pcf11G3X9Z4 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC17.83■□□□□ 0.44
Pcf11G3X9Z4 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcf11G3X9Z4 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcf11G3X9Z4 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Pcf11G3X9Z4 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
Pcf11G3X9Z4 Gm8111-201ENSMUST00000117659 987 ntBASIC17.83■□□□□ 0.44
Pcf11G3X9Z4 Gm11340-201ENSMUST00000119226 412 ntBASIC17.83■□□□□ 0.44
Pcf11G3X9Z4 Gm24992-201ENSMUST00000157412 130 ntBASIC17.83■□□□□ 0.44
Pcf11G3X9Z4 Ighv2-1-201ENSMUST00000170946 353 ntBASIC17.83■□□□□ 0.44
Pcf11G3X9Z4 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC17.83■□□□□ 0.44
Pcf11G3X9Z4 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.44
Pcf11G3X9Z4 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC17.83■□□□□ 0.44
Pcf11G3X9Z4 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcf11G3X9Z4 AC154184.3-201ENSMUST00000225620 1090 ntBASIC17.83■□□□□ 0.44
Pcf11G3X9Z4 CT025602.2-201ENSMUST00000226553 772 ntBASIC17.83■□□□□ 0.44
Pcf11G3X9Z4 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcf11G3X9Z4 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcf11G3X9Z4 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Pcf11G3X9Z4 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcf11G3X9Z4 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Pcf11G3X9Z4 Gm43570-201ENSMUST00000199951 3688 ntBASIC17.82■□□□□ 0.44
Pcf11G3X9Z4 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcf11G3X9Z4 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcf11G3X9Z4 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Pcf11G3X9Z4 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcf11G3X9Z4 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Pcf11G3X9Z4 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Pcf11G3X9Z4 Gm12194-201ENSMUST00000117756 1012 ntBASIC17.82■□□□□ 0.44
Pcf11G3X9Z4 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC17.82■□□□□ 0.44
Pcf11G3X9Z4 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcf11G3X9Z4 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC17.82■□□□□ 0.44
Pcf11G3X9Z4 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC17.82■□□□□ 0.44
Pcf11G3X9Z4 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Pcf11G3X9Z4 Gm5599-201ENSMUST00000209602 788 ntBASIC17.82■□□□□ 0.44
Pcf11G3X9Z4 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC17.82■□□□□ 0.44
Pcf11G3X9Z4 CT009536.2-201ENSMUST00000225370 665 ntBASIC17.82■□□□□ 0.44
Pcf11G3X9Z4 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Pcf11G3X9Z4 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcf11G3X9Z4 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcf11G3X9Z4 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcf11G3X9Z4 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcf11G3X9Z4 Gm15784-201ENSMUST00000120260 1462 ntBASIC17.82■□□□□ 0.44
Pcf11G3X9Z4 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcf11G3X9Z4 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcf11G3X9Z4 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcf11G3X9Z4 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC17.81■□□□□ 0.44
Pcf11G3X9Z4 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcf11G3X9Z4 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcf11G3X9Z4 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Pcf11G3X9Z4 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcf11G3X9Z4 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcf11G3X9Z4 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcf11G3X9Z4 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcf11G3X9Z4 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcf11G3X9Z4 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcf11G3X9Z4 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC17.81■□□□□ 0.44
Pcf11G3X9Z4 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcf11G3X9Z4 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pcf11G3X9Z4 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcf11G3X9Z4 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcf11G3X9Z4 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pcf11G3X9Z4 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcf11G3X9Z4 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcf11G3X9Z4 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcf11G3X9Z4 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcf11G3X9Z4 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcf11G3X9Z4 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcf11G3X9Z4 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms