Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Gm14999-201ENSMUST00000121039 624 ntBASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Gm13570-201ENSMUST00000140763 309 ntBASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Gm7809-201ENSMUST00000153199 742 ntBASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pcdh1F7BJK1 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Pcdh1F7BJK1 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pcdh1F7BJK1 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Pcdh1F7BJK1 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Pcdh1F7BJK1 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pcdh1F7BJK1 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Pcdh1F7BJK1 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pcdh1F7BJK1 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Gm12058-201ENSMUST00000118614 437 ntBASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Rprl1-201ENSMUST00000158050 327 ntBASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Gm24548-201ENSMUST00000158650 108 ntBASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Gm6266-201ENSMUST00000203844 806 ntBASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Gm4935-201ENSMUST00000221316 1198 ntBASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh1F7BJK1 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms