Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm5706-201ENSMUST00000181525 993 ntBASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Gm44323-201ENSMUST00000198689 129 ntBASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 AC123698.1-201ENSMUST00000227090 402 ntBASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Gm22341-201ENSMUST00000083775 129 ntBASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Gm28453-201ENSMUST00000185556 1323 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Olfr53-201ENSMUST00000084456 1328 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Gm12247-201ENSMUST00000117585 670 ntBASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Gm14760-201ENSMUST00000121831 999 ntBASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Gm15727-201ENSMUST00000122416 437 ntBASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Gm18299-201ENSMUST00000192026 636 ntBASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Gm18119-201ENSMUST00000219972 616 ntBASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 AC116596.1-201ENSMUST00000228112 1762 ntBASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Gm42651-201ENSMUST00000199851 1339 ntBASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Gm12796-201ENSMUST00000131864 344 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Rpl17-ps11-201ENSMUST00000161946 729 ntBASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 AC133517.1-201ENSMUST00000225825 594 ntBASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Gm7790-201ENSMUST00000118716 1310 ntBASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Gm22900-201ENSMUST00000104538 130 ntBASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Gm13217-201ENSMUST00000120466 953 ntBASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Gm25804-201ENSMUST00000122785 188 ntBASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Gm25770-201ENSMUST00000158566 115 ntBASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Gm9409-201ENSMUST00000197017 316 ntBASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Cd24a-202ENSMUST00000214476 743 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 AC154506.2-201ENSMUST00000225481 1276 ntBASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Gm2237-201ENSMUST00000112595 471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Gm26119-201ENSMUST00000175601 104 ntBASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Gm26698-201ENSMUST00000181290 971 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Gm5159-201ENSMUST00000212733 1652 ntBASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms