Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Gm11793-201ENSMUST00000120433 981 ntBASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Rmrp-201ENSMUST00000157463 271 ntBASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Gm38158-201ENSMUST00000194617 339 ntBASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Gm42627-201ENSMUST00000197347 224 ntBASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Gm44405-201ENSMUST00000198952 126 ntBASIC12.04□□□□□ -0.48
Gm28043E0CXC2 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Gm24231-201ENSMUST00000104315 133 ntBASIC12.03□□□□□ -0.48
Gm28043E0CXC2 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Gm13736-201ENSMUST00000119272 253 ntBASIC12.03□□□□□ -0.48
Gm28043E0CXC2 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Gm13316-201ENSMUST00000140537 691 ntBASIC12.03□□□□□ -0.48
Gm28043E0CXC2 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28043E0CXC2 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm28043E0CXC2 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm28043E0CXC2 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Gm28043E0CXC2 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Gm28043E0CXC2 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Gm28043E0CXC2 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Gm28043E0CXC2 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Gm28043E0CXC2 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm28043E0CXC2 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm28043E0CXC2 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm28043E0CXC2 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28043E0CXC2 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28043E0CXC2 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28043E0CXC2 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28043E0CXC2 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28043E0CXC2 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28043E0CXC2 Gm10434-201ENSMUST00000101158 471 ntBASIC12.02□□□□□ -0.49
Gm28043E0CXC2 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Gm28043E0CXC2 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28043E0CXC2 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.02□□□□□ -0.49
Gm28043E0CXC2 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28043E0CXC2 Gm13786-201ENSMUST00000122371 333 ntBASIC12.02□□□□□ -0.49
Gm28043E0CXC2 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.02□□□□□ -0.49
Gm28043E0CXC2 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28043E0CXC2 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
Gm28043E0CXC2 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.02□□□□□ -0.49
Gm28043E0CXC2 Mospd4-201ENSMUST00000180618 576 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms