Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.75□□□□□ -0.69
Shank1D3YZU1 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Gm12164-201ENSMUST00000121695 551 ntBASIC10.75□□□□□ -0.69
Shank1D3YZU1 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Gm18367-201ENSMUST00000176139 600 ntBASIC10.75□□□□□ -0.69
Shank1D3YZU1 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC10.75□□□□□ -0.69
Shank1D3YZU1 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.75□□□□□ -0.69
Shank1D3YZU1 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Gm7959-201ENSMUST00000221823 1078 ntBASIC10.75□□□□□ -0.69
Shank1D3YZU1 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.75□□□□□ -0.69
Shank1D3YZU1 AC136376.2-201ENSMUST00000228819 490 ntBASIC10.75□□□□□ -0.69
Shank1D3YZU1 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.75□□□□□ -0.69
Shank1D3YZU1 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Shank1D3YZU1 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Gm42769-201ENSMUST00000198576 1659 ntBASIC10.74□□□□□ -0.69
Shank1D3YZU1 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Gm15207-201ENSMUST00000119259 442 ntBASIC10.74□□□□□ -0.69
Shank1D3YZU1 Gm14219-201ENSMUST00000120414 288 ntBASIC10.74□□□□□ -0.69
Shank1D3YZU1 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.74□□□□□ -0.69
Shank1D3YZU1 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC10.74□□□□□ -0.69
Shank1D3YZU1 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC10.74□□□□□ -0.69
Shank1D3YZU1 Gm43610-201ENSMUST00000199117 365 ntBASIC10.74□□□□□ -0.69
Shank1D3YZU1 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shank1D3YZU1 CT030684.3-201ENSMUST00000227308 2445 ntBASIC10.74□□□□□ -0.69
Shank1D3YZU1 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shank1D3YZU1 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC10.74□□□□□ -0.69
Shank1D3YZU1 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shank1D3YZU1 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.73□□□□□ -0.69
Shank1D3YZU1 Gm12856-201ENSMUST00000119471 1293 ntBASIC10.73□□□□□ -0.69
Shank1D3YZU1 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.73□□□□□ -0.69
Shank1D3YZU1 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Gm42779-201ENSMUST00000198807 406 ntBASIC10.73□□□□□ -0.69
Shank1D3YZU1 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Gm18463-201ENSMUST00000207258 474 ntBASIC10.73□□□□□ -0.69
Shank1D3YZU1 Gm18460-201ENSMUST00000208088 464 ntBASIC10.73□□□□□ -0.69
Shank1D3YZU1 Gm3318-201ENSMUST00000217604 1183 ntBASIC10.73□□□□□ -0.69
Shank1D3YZU1 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Shank1D3YZU1 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms