Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Gm14021-201ENSMUST00000117683 961 ntBASIC9.62□□□□□ -0.87
Chd6A3KFM7 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Gm12499-201ENSMUST00000121961 546 ntBASIC9.62□□□□□ -0.87
Chd6A3KFM7 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Mir3100-201ENSMUST00000174918 65 ntBASIC9.62□□□□□ -0.87
Chd6A3KFM7 Gm36980-201ENSMUST00000195643 622 ntBASIC9.62□□□□□ -0.87
Chd6A3KFM7 Gm7565-201ENSMUST00000203611 623 ntBASIC9.62□□□□□ -0.87
Chd6A3KFM7 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
Chd6A3KFM7 AC107711.4-201ENSMUST00000228948 440 ntBASIC9.62□□□□□ -0.87
Chd6A3KFM7 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chd6A3KFM7 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Gm14113-201ENSMUST00000121399 976 ntBASIC9.62□□□□□ -0.87
Chd6A3KFM7 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC9.62□□□□□ -0.87
Chd6A3KFM7 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC9.62□□□□□ -0.87
Chd6A3KFM7 H2afy3-201ENSMUST00000151919 1112 ntBASIC9.62□□□□□ -0.87
Chd6A3KFM7 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Gm9162-201ENSMUST00000182081 991 ntBASIC9.62□□□□□ -0.87
Chd6A3KFM7 Gm37826-201ENSMUST00000195329 322 ntBASIC9.62□□□□□ -0.87
Chd6A3KFM7 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.62□□□□□ -0.87
Chd6A3KFM7 AC137871.1-201ENSMUST00000228278 475 ntBASIC9.62□□□□□ -0.87
Chd6A3KFM7 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Smok4a-201ENSMUST00000074512 1455 ntBASIC9.62□□□□□ -0.87
Chd6A3KFM7 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Chd6A3KFM7 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Gm20633-201ENSMUST00000176742 2831 ntBASIC9.62□□□□□ -0.87
Chd6A3KFM7 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chd6A3KFM7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Fthl17b-201ENSMUST00000105006 842 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Chd6A3KFM7 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Gm5419-201ENSMUST00000119301 527 ntBASIC9.62□□□□□ -0.87
Chd6A3KFM7 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Gm38145-201ENSMUST00000192319 693 ntBASIC9.62□□□□□ -0.87
Chd6A3KFM7 Gm5178-201ENSMUST00000219380 898 ntBASIC9.62□□□□□ -0.87
Chd6A3KFM7 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.61□□□□□ -0.87
Chd6A3KFM7 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Gm14715-201ENSMUST00000156823 643 ntTSL 3 BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Gm16030-201ENSMUST00000159098 603 ntBASIC9.61□□□□□ -0.87
Chd6A3KFM7 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Gm3150-201ENSMUST00000166418 204 ntBASIC9.61□□□□□ -0.87
Chd6A3KFM7 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Gm25735-201ENSMUST00000175164 215 ntBASIC9.61□□□□□ -0.87
Chd6A3KFM7 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Chd6A3KFM7 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Chd6A3KFM7 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Chd6A3KFM7 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Gm7833-201ENSMUST00000183288 990 ntBASIC9.61□□□□□ -0.87
Chd6A3KFM7 Mir7221-201ENSMUST00000184009 72 ntBASIC9.61□□□□□ -0.87
Chd6A3KFM7 Rp1-202ENSMUST00000194992 858 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Gm18035-201ENSMUST00000211962 589 ntBASIC9.61□□□□□ -0.87
Chd6A3KFM7 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms