Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1aA2APX8 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.49□□□□□ -0.41
Scn1aA2APX8 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.49□□□□□ -0.41
Scn1aA2APX8 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Gm14193-201ENSMUST00000105067 153 ntBASIC12.49□□□□□ -0.41
Scn1aA2APX8 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.49□□□□□ -0.41
Scn1aA2APX8 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Mir1943-201ENSMUST00000158276 73 ntBASIC12.49□□□□□ -0.41
Scn1aA2APX8 Gm18367-201ENSMUST00000176139 600 ntBASIC12.49□□□□□ -0.41
Scn1aA2APX8 Mir8115-201ENSMUST00000184992 119 ntBASIC12.49□□□□□ -0.41
Scn1aA2APX8 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Gm7504-201ENSMUST00000201449 424 ntBASIC12.49□□□□□ -0.41
Scn1aA2APX8 Gm44551-201ENSMUST00000208804 171 ntBASIC12.49□□□□□ -0.41
Scn1aA2APX8 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1aA2APX8 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1aA2APX8 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Scn1aA2APX8 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1aA2APX8 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1aA2APX8 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.48□□□□□ -0.41
Scn1aA2APX8 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1aA2APX8 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.48□□□□□ -0.41
Scn1aA2APX8 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1aA2APX8 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1aA2APX8 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Scn1aA2APX8 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.48□□□□□ -0.41
Scn1aA2APX8 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1aA2APX8 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1aA2APX8 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1aA2APX8 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Scn1aA2APX8 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Scn1aA2APX8 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.48□□□□□ -0.41
Scn1aA2APX8 Gm14263-201ENSMUST00000117955 746 ntBASIC12.48□□□□□ -0.41
Scn1aA2APX8 Gm13611-201ENSMUST00000118269 318 ntBASIC12.48□□□□□ -0.41
Scn1aA2APX8 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.48□□□□□ -0.41
Scn1aA2APX8 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1aA2APX8 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1aA2APX8 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1aA2APX8 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Scn1aA2APX8 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1aA2APX8 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1aA2APX8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1aA2APX8 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1aA2APX8 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1aA2APX8 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Gm9550-201ENSMUST00000161130 862 ntBASIC12.47□□□□□ -0.41
Scn1aA2APX8 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.47□□□□□ -0.41
Scn1aA2APX8 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Gm38314-201ENSMUST00000195709 625 ntBASIC12.47□□□□□ -0.41
Scn1aA2APX8 Gm45118-201ENSMUST00000208928 825 ntBASIC12.47□□□□□ -0.41
Scn1aA2APX8 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.47□□□□□ -0.41
Scn1aA2APX8 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.47□□□□□ -0.41
Scn1aA2APX8 Gm29787-201ENSMUST00000222129 849 ntBASIC12.47□□□□□ -0.41
Scn1aA2APX8 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.47□□□□□ -0.41
Scn1aA2APX8 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1aA2APX8 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.47□□□□□ -0.41
Scn1aA2APX8 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Gm11783-201ENSMUST00000119549 885 ntBASIC12.47□□□□□ -0.41
Scn1aA2APX8 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Scn1aA2APX8 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.47□□□□□ -0.41
Scn1aA2APX8 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.47□□□□□ -0.41
Scn1aA2APX8 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms