Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.03□□□□□ -0.96
Trav7n-4A0A075B620 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Trav7n-4A0A075B620 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC9.03□□□□□ -0.96
Trav7n-4A0A075B620 AC156560.2-201ENSMUST00000221232 264 ntBASIC9.03□□□□□ -0.96
Trav7n-4A0A075B620 Gm807-202ENSMUST00000224929 408 ntBASIC9.03□□□□□ -0.96
Trav7n-4A0A075B620 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC9.03□□□□□ -0.96
Trav7n-4A0A075B620 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
Trav7n-4A0A075B620 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav7n-4A0A075B620 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav7n-4A0A075B620 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav7n-4A0A075B620 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav7n-4A0A075B620 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav7n-4A0A075B620 Gm26232-201ENSMUST00000083360 166 ntBASIC9.03□□□□□ -0.96
Trav7n-4A0A075B620 Rnu1b6-201ENSMUST00000083839 166 ntBASIC9.03□□□□□ -0.96
Trav7n-4A0A075B620 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Trav7n-4A0A075B620 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav7n-4A0A075B620 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav7n-4A0A075B620 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Trav7n-4A0A075B620 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav7n-4A0A075B620 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Trav7n-4A0A075B620 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC9.03□□□□□ -0.96
Trav7n-4A0A075B620 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC9.03□□□□□ -0.96
Trav7n-4A0A075B620 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav7n-4A0A075B620 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav7n-4A0A075B620 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav7n-4A0A075B620 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav7n-4A0A075B620 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav7n-4A0A075B620 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav7n-4A0A075B620 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav7n-4A0A075B620 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Trav7n-4A0A075B620 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC9.02□□□□□ -0.96
Trav7n-4A0A075B620 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trav7n-4A0A075B620 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trav7n-4A0A075B620 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trav7n-4A0A075B620 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trav7n-4A0A075B620 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Gm38089-201ENSMUST00000193585 1514 ntBASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Gm15429-201ENSMUST00000151268 798 ntBASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Gm37171-201ENSMUST00000192636 1185 ntBASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Gm44958-201ENSMUST00000203734 736 ntBASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Gm18307-201ENSMUST00000206864 949 ntBASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 AC122197.2-201ENSMUST00000219196 1635 ntBASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav7n-4A0A075B620 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms