Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Gm15198-201ENSMUST00000117283 177 ntBASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Gm32999-201ENSMUST00000192693 562 ntBASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Rprl1-202ENSMUST00000198476 238 ntBASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb2S4R1M3 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.97□□□□□ -0.49
H2afb2S4R1M3 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Mir1938-201ENSMUST00000158746 100 ntBASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Gm20482-202ENSMUST00000174729 825 ntBASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Gm43179-201ENSMUST00000198797 275 ntBASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Gm44651-201ENSMUST00000207343 372 ntBASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb2S4R1M3 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb2S4R1M3 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb2S4R1M3 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb2S4R1M3 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb2S4R1M3 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb2S4R1M3 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb2S4R1M3 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb2S4R1M3 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
H2afb2S4R1M3 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb2S4R1M3 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb2S4R1M3 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb2S4R1M3 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.96□□□□□ -0.49
H2afb2S4R1M3 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.96□□□□□ -0.49
H2afb2S4R1M3 Gm4607-201ENSMUST00000206649 577 ntBASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms