Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Gm23912-201ENSMUST00000104687 87 ntBASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Gm11930-201ENSMUST00000117788 190 ntBASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Gm3096-201ENSMUST00000185770 364 ntBASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
ClcnkaQ9WUB7 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Gm43758-201ENSMUST00000199500 367 ntBASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClcnkaQ9WUB7 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms