Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Gm15236-201ENSMUST00000117309 379 ntBASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Gm12196-201ENSMUST00000120954 262 ntBASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Gm17040-202ENSMUST00000170597 889 ntBASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Gm18730-201ENSMUST00000218038 343 ntBASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubd1Q9R1K7 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Gm12266-201ENSMUST00000120311 962 ntBASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Gm2965-201ENSMUST00000198365 343 ntBASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Gm6867-201ENSMUST00000219165 425 ntBASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Tubd1Q9R1K7 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms