Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a4Q9QZR9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Col4a4Q9QZR9 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC11.72□□□□□ -0.53
Col4a4Q9QZR9 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a4Q9QZR9 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Col4a4Q9QZR9 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a4Q9QZR9 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a4Q9QZR9 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a4Q9QZR9 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a4Q9QZR9 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a4Q9QZR9 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a4Q9QZR9 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a4Q9QZR9 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a4Q9QZR9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a4Q9QZR9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a4Q9QZR9 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 Gm12470-201ENSMUST00000117239 1049 ntBASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 Gm5395-201ENSMUST00000121650 915 ntBASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 AC117769.1-201ENSMUST00000224716 1120 ntBASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col4a4Q9QZR9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Col4a4Q9QZR9 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Col4a4Q9QZR9 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.71□□□□□ -0.54
Col4a4Q9QZR9 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.71□□□□□ -0.54
Col4a4Q9QZR9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col4a4Q9QZR9 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Col4a4Q9QZR9 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col4a4Q9QZR9 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col4a4Q9QZR9 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Col4a4Q9QZR9 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Col4a4Q9QZR9 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.54
Col4a4Q9QZR9 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Col4a4Q9QZR9 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.71□□□□□ -0.54
Col4a4Q9QZR9 Gm26119-201ENSMUST00000175601 104 ntBASIC11.71□□□□□ -0.54
Col4a4Q9QZR9 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC11.71□□□□□ -0.54
Col4a4Q9QZR9 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.71□□□□□ -0.54
Col4a4Q9QZR9 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Col4a4Q9QZR9 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col4a4Q9QZR9 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Col4a4Q9QZR9 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col4a4Q9QZR9 Gm6478-201ENSMUST00000099450 742 ntBASIC11.71□□□□□ -0.54
Col4a4Q9QZR9 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col4a4Q9QZR9 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col4a4Q9QZR9 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Col4a4Q9QZR9 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col4a4Q9QZR9 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Col4a4Q9QZR9 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Col4a4Q9QZR9 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.71□□□□□ -0.54
Col4a4Q9QZR9 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a4Q9QZR9 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.7□□□□□ -0.54
Col4a4Q9QZR9 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a4Q9QZR9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a4Q9QZR9 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a4Q9QZR9 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a4Q9QZR9 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a4Q9QZR9 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a4Q9QZR9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a4Q9QZR9 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a4Q9QZR9 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Col4a4Q9QZR9 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a4Q9QZR9 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Col4a4Q9QZR9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a4Q9QZR9 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a4Q9QZR9 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Col4a4Q9QZR9 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.7□□□□□ -0.54
Col4a4Q9QZR9 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.7□□□□□ -0.54
Col4a4Q9QZR9 Gm6612-201ENSMUST00000170777 395 ntBASIC11.7□□□□□ -0.54
Col4a4Q9QZR9 Mir6387-201ENSMUST00000184042 108 ntBASIC11.7□□□□□ -0.54
Col4a4Q9QZR9 Gm43866-201ENSMUST00000203894 839 ntBASIC11.7□□□□□ -0.54
Col4a4Q9QZR9 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC11.7□□□□□ -0.54
Col4a4Q9QZR9 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.7□□□□□ -0.54
Col4a4Q9QZR9 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Col4a4Q9QZR9 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC11.7□□□□□ -0.54
Col4a4Q9QZR9 AC134601.2-201ENSMUST00000221071 130 ntBASIC11.7□□□□□ -0.54
Col4a4Q9QZR9 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms