Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf3Q9QXK7 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf3Q9QXK7 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf3Q9QXK7 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cpsf3Q9QXK7 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf3Q9QXK7 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf3Q9QXK7 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf3Q9QXK7 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf3Q9QXK7 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf3Q9QXK7 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.89□□□□□ -0.35
Cpsf3Q9QXK7 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Gm12857-201ENSMUST00000117678 592 ntBASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Gm25881-201ENSMUST00000157783 103 ntBASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Gm26461-201ENSMUST00000175064 290 ntBASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cpsf3Q9QXK7 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cpsf3Q9QXK7 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf3Q9QXK7 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Cpsf3Q9QXK7 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf3Q9QXK7 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cpsf3Q9QXK7 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf3Q9QXK7 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.87□□□□□ -0.35
Cpsf3Q9QXK7 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf3Q9QXK7 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.87□□□□□ -0.35
Cpsf3Q9QXK7 Gm9136-201ENSMUST00000193368 454 ntBASIC12.87□□□□□ -0.35
Cpsf3Q9QXK7 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf3Q9QXK7 Gm19287-201ENSMUST00000203190 358 ntBASIC12.87□□□□□ -0.35
Cpsf3Q9QXK7 Gm7848-201ENSMUST00000210739 718 ntBASIC12.87□□□□□ -0.35
Cpsf3Q9QXK7 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.87□□□□□ -0.35
Cpsf3Q9QXK7 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cpsf3Q9QXK7 Cog3-203ENSMUST00000227473 4197 ntBASIC12.87□□□□□ -0.35
Cpsf3Q9QXK7 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf3Q9QXK7 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf3Q9QXK7 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.87□□□□□ -0.35
Cpsf3Q9QXK7 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf3Q9QXK7 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf3Q9QXK7 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf3Q9QXK7 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf3Q9QXK7 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf3Q9QXK7 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf3Q9QXK7 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf3Q9QXK7 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Cpsf3Q9QXK7 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf3Q9QXK7 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf3Q9QXK7 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf3Q9QXK7 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cpsf3Q9QXK7 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf3Q9QXK7 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf3Q9QXK7 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf3Q9QXK7 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Cpsf3Q9QXK7 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf3Q9QXK7 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf3Q9QXK7 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf3Q9QXK7 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf3Q9QXK7 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf3Q9QXK7 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Cpsf3Q9QXK7 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf3Q9QXK7 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.86□□□□□ -0.35
Cpsf3Q9QXK7 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.86□□□□□ -0.35
Cpsf3Q9QXK7 Gm11450-201ENSMUST00000121144 333 ntBASIC12.86□□□□□ -0.35
Cpsf3Q9QXK7 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.86□□□□□ -0.35
Cpsf3Q9QXK7 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf3Q9QXK7 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf3Q9QXK7 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Cpsf3Q9QXK7 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.86□□□□□ -0.35
Cpsf3Q9QXK7 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.86□□□□□ -0.35
Cpsf3Q9QXK7 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms