Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC11.46□□□□□ -0.57
SrfQ9JM73 Gm16285-201ENSMUST00000162999 347 ntBASIC11.46□□□□□ -0.57
SrfQ9JM73 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.46□□□□□ -0.57
SrfQ9JM73 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SrfQ9JM73 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.46□□□□□ -0.57
SrfQ9JM73 Gm20177-201ENSMUST00000203705 334 ntBASIC11.46□□□□□ -0.57
SrfQ9JM73 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SrfQ9JM73 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC11.46□□□□□ -0.57
SrfQ9JM73 Gm19091-201ENSMUST00000208120 978 ntBASIC11.46□□□□□ -0.57
SrfQ9JM73 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.46□□□□□ -0.57
SrfQ9JM73 AC116589.4-201ENSMUST00000222390 216 ntBASIC11.46□□□□□ -0.57
SrfQ9JM73 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.46□□□□□ -0.57
SrfQ9JM73 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
SrfQ9JM73 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SrfQ9JM73 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
SrfQ9JM73 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
SrfQ9JM73 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SrfQ9JM73 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SrfQ9JM73 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
SrfQ9JM73 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SrfQ9JM73 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
SrfQ9JM73 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
SrfQ9JM73 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SrfQ9JM73 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
SrfQ9JM73 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SrfQ9JM73 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.45□□□□□ -0.58
SrfQ9JM73 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
SrfQ9JM73 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
SrfQ9JM73 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Tcrg-V1-201ENSMUST00000103564 374 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
SrfQ9JM73 Gm26013-201ENSMUST00000104404 119 ntBASIC11.45□□□□□ -0.58
SrfQ9JM73 Gm12507-201ENSMUST00000119155 415 ntBASIC11.45□□□□□ -0.58
SrfQ9JM73 Gm11836-201ENSMUST00000121022 441 ntBASIC11.45□□□□□ -0.58
SrfQ9JM73 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.45□□□□□ -0.58
SrfQ9JM73 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC11.45□□□□□ -0.58
SrfQ9JM73 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
SrfQ9JM73 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Gm18717-201ENSMUST00000192744 1241 ntBASIC11.45□□□□□ -0.58
SrfQ9JM73 Gm38117-201ENSMUST00000194653 939 ntBASIC11.45□□□□□ -0.58
SrfQ9JM73 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.45□□□□□ -0.58
SrfQ9JM73 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.45□□□□□ -0.58
SrfQ9JM73 Gm19253-201ENSMUST00000204279 307 ntBASIC11.45□□□□□ -0.58
SrfQ9JM73 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
SrfQ9JM73 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.45□□□□□ -0.58
SrfQ9JM73 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.45□□□□□ -0.58
SrfQ9JM73 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.45□□□□□ -0.58
SrfQ9JM73 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SrfQ9JM73 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.44□□□□□ -0.58
SrfQ9JM73 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.44□□□□□ -0.58
SrfQ9JM73 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
SrfQ9JM73 AC122539.3-201ENSMUST00000218355 1431 ntBASIC11.44□□□□□ -0.58
SrfQ9JM73 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.44□□□□□ -0.58
SrfQ9JM73 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
SrfQ9JM73 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
SrfQ9JM73 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms