Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Gm14028-201ENSMUST00000117434 479 ntBASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Gm12857-201ENSMUST00000117678 592 ntBASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Gm12997-201ENSMUST00000120207 640 ntBASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Gm24990-201ENSMUST00000157406 323 ntBASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Gm27341-201ENSMUST00000183570 106 ntBASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Gm2553-201ENSMUST00000215986 605 ntBASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Gm18730-201ENSMUST00000218038 343 ntBASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Mir433-201ENSMUST00000093564 124 ntBASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Gm27552-201ENSMUST00000183351 62 ntBASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Gm27844-201ENSMUST00000183613 62 ntBASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Gm27530-201ENSMUST00000184096 98 ntBASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Gm38314-201ENSMUST00000195709 625 ntBASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk3aQ9JKX8 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms