Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 AC140462.2-201ENSMUST00000225718 2433 ntBASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Gm26574-201ENSMUST00000181876 2141 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Gphn-201ENSMUST00000052472 3570 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Gm5303-201ENSMUST00000117943 1252 ntBASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Gm11524-201ENSMUST00000119349 807 ntBASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Gm42550-201ENSMUST00000201553 960 ntBASIC10.72□□□□□ -0.69
Trem1Q9JKE2 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 AC238811.1-201ENSMUST00000225302 441 ntBASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Gm8396-201ENSMUST00000057361 823 ntBASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Cog3-203ENSMUST00000227473 4197 ntBASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trem1Q9JKE2 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Gm38054-201ENSMUST00000192380 2167 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC10.71□□□□□ -0.69
Trem1Q9JKE2 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms