Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Gm18304-201ENSMUST00000189162 546 ntBASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Gm44967-201ENSMUST00000207047 631 ntBASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Gm14109-201ENSMUST00000118814 309 ntBASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Gm12997-201ENSMUST00000120207 640 ntBASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Gm13315-201ENSMUST00000120376 991 ntBASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Gm9083-201ENSMUST00000120423 819 ntBASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 AA914427-201ENSMUST00000193194 1166 ntBASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Gm5363-201ENSMUST00000211927 938 ntBASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tubb3Q9ERD7 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms