Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Chmp2aQ9DB34 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2aQ9DB34 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Chmp2aQ9DB34 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2aQ9DB34 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.52□□□□□ -0.41
Chmp2aQ9DB34 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.52□□□□□ -0.41
Chmp2aQ9DB34 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Chmp2aQ9DB34 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2aQ9DB34 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2aQ9DB34 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2aQ9DB34 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.52□□□□□ -0.41
Chmp2aQ9DB34 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2aQ9DB34 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Chmp2aQ9DB34 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2aQ9DB34 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2aQ9DB34 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2aQ9DB34 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2aQ9DB34 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Chmp2aQ9DB34 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2aQ9DB34 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2aQ9DB34 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2aQ9DB34 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2aQ9DB34 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Chmp2aQ9DB34 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Chmp2aQ9DB34 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Gm8385-201ENSMUST00000058999 643 ntBASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2aQ9DB34 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 Gm14208-201ENSMUST00000119645 678 ntBASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 Gm45433-201ENSMUST00000209386 247 ntBASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2aQ9DB34 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms