Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gm13097-201ENSMUST00000210722 397 ntBASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 AC129931.1-201ENSMUST00000228865 1861 ntBASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Gm38341-201ENSMUST00000195357 515 ntBASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Gm44651-201ENSMUST00000207343 372 ntBASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Aprt-ps-201ENSMUST00000212311 505 ntBASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 AC093022.4-203ENSMUST00000228523 2657 ntBASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC15.11■□□□□ 0.01
Chmp4bQ9D8B3 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Gm12201-201ENSMUST00000120657 1234 ntBASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Gm20482-202ENSMUST00000174729 825 ntBASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Gm6114-201ENSMUST00000182472 968 ntBASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Mir8109-201ENSMUST00000184375 117 ntBASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Gm7895-201ENSMUST00000187459 1173 ntBASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Gm18615-201ENSMUST00000222919 1031 ntBASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Gzmn-202ENSMUST00000225535 989 ntBASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp4bQ9D8B3 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp4bQ9D8B3 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp4bQ9D8B3 Gm24255-201ENSMUST00000104481 128 ntBASIC15.09■□□□□ 0.01
Chmp4bQ9D8B3 Gm15276-201ENSMUST00000145953 498 ntBASIC15.09■□□□□ 0.01
Chmp4bQ9D8B3 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp4bQ9D8B3 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC15.09■□□□□ 0.01
Chmp4bQ9D8B3 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.09■□□□□ 0.01
Chmp4bQ9D8B3 Gm8956-201ENSMUST00000203939 825 ntBASIC15.09■□□□□ 0.01
Chmp4bQ9D8B3 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Chmp4bQ9D8B3 AC159896.2-201ENSMUST00000214753 269 ntBASIC15.09■□□□□ 0.01
Chmp4bQ9D8B3 AC154319.1-201ENSMUST00000216330 312 ntBASIC15.09■□□□□ 0.01
Chmp4bQ9D8B3 AL589735.1-201ENSMUST00000224353 270 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms