Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 Snora78-201ENSMUST00000158630 128 ntBASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 Gm19309-201ENSMUST00000218295 205 ntBASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4cQ9D7F7 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Chmp4cQ9D7F7 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Chmp4cQ9D7F7 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chmp4cQ9D7F7 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.33□□□□□ -0.12
Chmp4cQ9D7F7 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4cQ9D7F7 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.33□□□□□ -0.12
Chmp4cQ9D7F7 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4cQ9D7F7 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4cQ9D7F7 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4cQ9D7F7 Gm15370-201ENSMUST00000117158 253 ntBASIC14.33□□□□□ -0.12
Chmp4cQ9D7F7 Gm14127-201ENSMUST00000117906 678 ntBASIC14.33□□□□□ -0.12
Chmp4cQ9D7F7 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.33□□□□□ -0.12
Chmp4cQ9D7F7 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4cQ9D7F7 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.33□□□□□ -0.12
Chmp4cQ9D7F7 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Chmp4cQ9D7F7 Gm5950-201ENSMUST00000213337 772 ntBASIC14.33□□□□□ -0.12
Chmp4cQ9D7F7 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4cQ9D7F7 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4cQ9D7F7 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4cQ9D7F7 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Chmp4cQ9D7F7 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC14.33□□□□□ -0.12
Chmp4cQ9D7F7 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4cQ9D7F7 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4cQ9D7F7 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC14.33□□□□□ -0.12
Chmp4cQ9D7F7 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4cQ9D7F7 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4cQ9D7F7 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4cQ9D7F7 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4cQ9D7F7 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.33□□□□□ -0.12
Chmp4cQ9D7F7 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4cQ9D7F7 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4cQ9D7F7 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4cQ9D7F7 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 Gm5859-201ENSMUST00000165401 2324 ntBASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 Gm24934-201ENSMUST00000103764 111 ntBASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 Gm11793-201ENSMUST00000120433 981 ntBASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 Gm28882-201ENSMUST00000185504 314 ntBASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 Gm43118-201ENSMUST00000199149 775 ntBASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 Gm18054-201ENSMUST00000207539 555 ntBASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.32□□□□□ -0.12
Chmp4cQ9D7F7 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 660.4 ms