Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Sf3a3Q9D554 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Sf3a3Q9D554 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Sf3a3Q9D554 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Gm8099-201ENSMUST00000200510 742 ntBASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Sf3a3Q9D554 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Gm11597-201ENSMUST00000121423 964 ntBASIC12.07□□□□□ -0.48
Sf3a3Q9D554 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Gm6736-201ENSMUST00000166583 948 ntBASIC12.07□□□□□ -0.48
Sf3a3Q9D554 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 AC125409.1-201ENSMUST00000223213 3370 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms