Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stag1Q9D3E6 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Gm13916-201ENSMUST00000117368 628 ntBASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Gm27390-201ENSMUST00000184516 176 ntBASIC14.29□□□□□ -0.12
Stag1Q9D3E6 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Gm2553-201ENSMUST00000215986 605 ntBASIC14.29□□□□□ -0.12
Stag1Q9D3E6 AC153937.1-201ENSMUST00000218734 412 ntBASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stag1Q9D3E6 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Gm12579-201ENSMUST00000118040 783 ntBASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Gm14585-201ENSMUST00000120713 634 ntBASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Gm5714-201ENSMUST00000197343 566 ntBASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Gm19287-201ENSMUST00000203190 358 ntBASIC14.28□□□□□ -0.12
Stag1Q9D3E6 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Gm17931-201ENSMUST00000208132 634 ntBASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Gm6867-201ENSMUST00000219165 425 ntBASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stag1Q9D3E6 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Stag1Q9D3E6 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Stag1Q9D3E6 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Stag1Q9D3E6 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Stag1Q9D3E6 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Stag1Q9D3E6 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Stag1Q9D3E6 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms