Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Gm13315-201ENSMUST00000120376 991 ntBASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Gm9083-201ENSMUST00000120423 819 ntBASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Gm27892-201ENSMUST00000185017 106 ntBASIC11.09□□□□□ -0.63
Trim13Q9CYB0 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim13Q9CYB0 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Mir1894-201ENSMUST00000122802 81 ntBASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Gm6244-201ENSMUST00000178732 841 ntBASIC11.08□□□□□ -0.64
Trim13Q9CYB0 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Gm5035-201ENSMUST00000215581 927 ntBASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Gm17794-201ENSMUST00000220252 955 ntBASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Gm5356-201ENSMUST00000093326 615 ntBASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim13Q9CYB0 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms