Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.45□□□□□ -0.58
Otud1Q9CUB6 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.45□□□□□ -0.58
Otud1Q9CUB6 Gm28071-201ENSMUST00000190355 478 ntBASIC11.45□□□□□ -0.58
Otud1Q9CUB6 Gm37751-201ENSMUST00000192440 1198 ntBASIC11.45□□□□□ -0.58
Otud1Q9CUB6 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC11.45□□□□□ -0.58
Otud1Q9CUB6 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.45□□□□□ -0.58
Otud1Q9CUB6 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Otud1Q9CUB6 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Otud1Q9CUB6 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Otud1Q9CUB6 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Otud1Q9CUB6 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Otud1Q9CUB6 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Otud1Q9CUB6 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.45□□□□□ -0.58
Otud1Q9CUB6 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Otud1Q9CUB6 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Otud1Q9CUB6 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Otud1Q9CUB6 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Otud1Q9CUB6 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.45□□□□□ -0.58
Otud1Q9CUB6 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Otud1Q9CUB6 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Otud1Q9CUB6 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.45□□□□□ -0.58
Otud1Q9CUB6 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Otud1Q9CUB6 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Otud1Q9CUB6 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Otud1Q9CUB6 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Otud1Q9CUB6 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Otud1Q9CUB6 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Mir3102-201ENSMUST00000175555 104 ntBASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Gm45072-201ENSMUST00000208673 929 ntBASIC11.44□□□□□ -0.58
Otud1Q9CUB6 AC165260.5-201ENSMUST00000224640 1247 ntBASIC11.44□□□□□ -0.58
Otud1Q9CUB6 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.44□□□□□ -0.58
Otud1Q9CUB6 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC11.44□□□□□ -0.58
Otud1Q9CUB6 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Otud1Q9CUB6 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Otud1Q9CUB6 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Otud1Q9CUB6 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Otud1Q9CUB6 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Otud1Q9CUB6 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.43□□□□□ -0.58
Otud1Q9CUB6 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Otud1Q9CUB6 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Otud1Q9CUB6 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Otud1Q9CUB6 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.43□□□□□ -0.58
Otud1Q9CUB6 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Otud1Q9CUB6 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Otud1Q9CUB6 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Otud1Q9CUB6 Gm9440-201ENSMUST00000119667 539 ntBASIC11.43□□□□□ -0.58
Otud1Q9CUB6 Gm14301-201ENSMUST00000120181 324 ntBASIC11.43□□□□□ -0.58
Otud1Q9CUB6 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Otud1Q9CUB6 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Otud1Q9CUB6 Gm17790-201ENSMUST00000191545 1228 ntBASIC11.43□□□□□ -0.58
Otud1Q9CUB6 Gm19208-201ENSMUST00000213861 912 ntBASIC11.43□□□□□ -0.58
Otud1Q9CUB6 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Otud1Q9CUB6 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Otud1Q9CUB6 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Otud1Q9CUB6 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Otud1Q9CUB6 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Otud1Q9CUB6 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms