Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm7642-201ENSMUST00000216345 1809 ntBASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 AC138329.2-201ENSMUST00000225579 1842 ntBASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 AC124397.2-201ENSMUST00000225575 2215 ntBASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Gm43963-201ENSMUST00000203466 2488 ntBASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Gm31326-201ENSMUST00000191856 1048 ntBASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Gm24136-201ENSMUST00000083374 165 ntBASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Gm19040-201ENSMUST00000203280 4726 ntBASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 AC129336.1-201ENSMUST00000220224 2277 ntBASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Gm43760-201ENSMUST00000202120 3015 ntBASIC9.72□□□□□ -0.85
RTRAFQ9CQE8 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
RTRAFQ9CQE8 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
RTRAFQ9CQE8 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
RTRAFQ9CQE8 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
RTRAFQ9CQE8 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
RTRAFQ9CQE8 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
RTRAFQ9CQE8 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
RTRAFQ9CQE8 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
RTRAFQ9CQE8 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
RTRAFQ9CQE8 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
RTRAFQ9CQE8 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Gm5687-201ENSMUST00000118252 640 ntBASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Gm6736-201ENSMUST00000166583 948 ntBASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Gm27838-201ENSMUST00000184829 128 ntBASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Gm29667-201ENSMUST00000190817 490 ntBASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Gm43514-201ENSMUST00000198852 424 ntBASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Gm37580-201ENSMUST00000192408 2800 ntBASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms