Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 Gm25700-201ENSMUST00000177693 110 ntBASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 Mir6420-201ENSMUST00000185032 102 ntBASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Gm12164-201ENSMUST00000121695 551 ntBASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa3Q9CQ71 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Rpa3Q9CQ71 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa3Q9CQ71 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa3Q9CQ71 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa3Q9CQ71 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa3Q9CQ71 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.67□□□□□ -0.38
Rpa3Q9CQ71 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Rpa3Q9CQ71 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa3Q9CQ71 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa3Q9CQ71 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa3Q9CQ71 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa3Q9CQ71 Gm5419-201ENSMUST00000119301 527 ntBASIC12.67□□□□□ -0.38
Rpa3Q9CQ71 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa3Q9CQ71 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa3Q9CQ71 Gm43962-201ENSMUST00000203898 190 ntBASIC12.67□□□□□ -0.38
Rpa3Q9CQ71 Gm17931-201ENSMUST00000208132 634 ntBASIC12.67□□□□□ -0.38
Rpa3Q9CQ71 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.67□□□□□ -0.38
Rpa3Q9CQ71 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa3Q9CQ71 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa3Q9CQ71 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa3Q9CQ71 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa3Q9CQ71 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa3Q9CQ71 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa3Q9CQ71 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa3Q9CQ71 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa3Q9CQ71 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa3Q9CQ71 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa3Q9CQ71 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa3Q9CQ71 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms