Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Gm12164-201ENSMUST00000121695 551 ntBASIC13.67□□□□□ -0.22
Trim11Q99PQ2 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Gm3096-201ENSMUST00000185770 364 ntBASIC13.67□□□□□ -0.22
Trim11Q99PQ2 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.67□□□□□ -0.22
Trim11Q99PQ2 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Gm6621-201ENSMUST00000193251 772 ntBASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Gm9368-201ENSMUST00000219348 831 ntBASIC13.67□□□□□ -0.22
Trim11Q99PQ2 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim11Q99PQ2 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Gm23270-201ENSMUST00000104055 131 ntBASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Gm11989-201ENSMUST00000117240 672 ntBASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Gm11362-201ENSMUST00000118838 850 ntBASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Gm5419-201ENSMUST00000119301 527 ntBASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Gm7722-201ENSMUST00000120646 741 ntBASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Gm2991-201ENSMUST00000173338 480 ntBASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim11Q99PQ2 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Gm31256-201ENSMUST00000194705 506 ntBASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Gm7399-201ENSMUST00000032395 858 ntBASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Gm6211-201ENSMUST00000147973 4275 ntBASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim11Q99PQ2 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Gm14726-201ENSMUST00000120623 896 ntBASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Gm21769-201ENSMUST00000211922 111 ntBASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms