Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac9Q99N13 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac9Q99N13 Cog3-203ENSMUST00000227473 4197 ntBASIC14.11□□□□□ -0.15
Hdac9Q99N13 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.11□□□□□ -0.15
Hdac9Q99N13 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac9Q99N13 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Hdac9Q99N13 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac9Q99N13 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.11□□□□□ -0.15
Hdac9Q99N13 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac9Q99N13 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac9Q99N13 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac9Q99N13 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac9Q99N13 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac9Q99N13 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.1□□□□□ -0.15
Hdac9Q99N13 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac9Q99N13 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac9Q99N13 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.1□□□□□ -0.15
Hdac9Q99N13 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac9Q99N13 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac9Q99N13 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac9Q99N13 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac9Q99N13 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac9Q99N13 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac9Q99N13 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac9Q99N13 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac9Q99N13 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac9Q99N13 Gm14942-201ENSMUST00000119642 336 ntBASIC14.1□□□□□ -0.15
Hdac9Q99N13 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Hdac9Q99N13 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Hdac9Q99N13 Gm28388-201ENSMUST00000186262 437 ntBASIC14.1□□□□□ -0.15
Hdac9Q99N13 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC14.1□□□□□ -0.15
Hdac9Q99N13 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac9Q99N13 Gm19009-201ENSMUST00000223072 823 ntBASIC14.1□□□□□ -0.15
Hdac9Q99N13 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Hdac9Q99N13 n-R5s211-201ENSMUST00000093689 119 ntBASIC14.1□□□□□ -0.15
Hdac9Q99N13 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac9Q99N13 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac9Q99N13 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac9Q99N13 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac9Q99N13 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac9Q99N13 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac9Q99N13 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac9Q99N13 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac9Q99N13 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac9Q99N13 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.1□□□□□ -0.15
Hdac9Q99N13 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac9Q99N13 CT009489.1-201ENSMUST00000227740 1893 ntBASIC14.1□□□□□ -0.15
Hdac9Q99N13 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac9Q99N13 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac9Q99N13 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.09□□□□□ -0.15
Hdac9Q99N13 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Gm7150-201ENSMUST00000122032 981 ntBASIC14.09□□□□□ -0.15
Hdac9Q99N13 Gm12628-201ENSMUST00000122193 382 ntBASIC14.09□□□□□ -0.15
Hdac9Q99N13 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC14.09□□□□□ -0.15
Hdac9Q99N13 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Gm18367-201ENSMUST00000176139 600 ntBASIC14.09□□□□□ -0.15
Hdac9Q99N13 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac9Q99N13 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC14.09□□□□□ -0.15
Hdac9Q99N13 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Gm5298-201ENSMUST00000201122 892 ntBASIC14.09□□□□□ -0.15
Hdac9Q99N13 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.09□□□□□ -0.15
Hdac9Q99N13 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac9Q99N13 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac9Q99N13 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hdac9Q99N13 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hdac9Q99N13 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC14.08□□□□□ -0.16
Hdac9Q99N13 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hdac9Q99N13 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hdac9Q99N13 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC14.08□□□□□ -0.16
Hdac9Q99N13 Gm11783-201ENSMUST00000119549 885 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms