Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chmp1b1Q99LU0 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Gm13297-201ENSMUST00000120205 934 ntBASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Gm2991-201ENSMUST00000173338 480 ntBASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chmp1b1Q99LU0 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Gm24934-201ENSMUST00000103764 111 ntBASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Gm28882-201ENSMUST00000185504 314 ntBASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Gm4034-201ENSMUST00000187674 480 ntBASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.35□□□□□ -0.59
Chmp1b1Q99LU0 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms